RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 GRIP2Q9C0E4 1043 aa7.26□□□□□ -1.25
UBE4B-209ENST00000487244 FZD3Q9NPG1 666 aa7.26□□□□□ -1.25
UBE4B-209ENST00000487244 ZFR2Q9UPR6 939 aaKnown RBP7.26□□□□□ -1.25
UBE4B-209ENST00000487244 SNX11Q9Y5W9 270 aa7.26□□□□□ -1.25
UBE4B-209ENST00000487244 A0A1W2PQU0 124 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 A0A1W2PR77 199 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 ARHGAP42A6NI28 874 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 C3orf70A6NLC5 250 aaPredicted RBP7.25□□□□□ -1.25
UBE4B-209ENST00000487244 C16orf96A6NNT2 1141 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 H0Y8X5 98 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 SLC31A1O15431 190 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 WIPF1O43516 503 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 BUB1BO60566 1050 aaPredicted RBP7.25□□□□□ -1.25
UBE4B-209ENST00000487244 MTA2O94776 668 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 POP4O95707 220 aaKnown RBP7.25□□□□□ -1.25
UBE4B-209ENST00000487244 IGSF6O95976 241 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 PEX11BO96011 259 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 IL2RAP01589 272 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 CD59P13987 128 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 SDHBP21912 280 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 MAN1A1P33908 653 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 GRIA4P48058 902 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 NEK3P51956 506 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 SNRPD1P62314 119 aaKnown RBP7.25□□□□□ -1.25
UBE4B-209ENST00000487244 SLC10A7Q0GE19 358 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 POU4F2Q12837 409 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 SFSWAPQ12872 951 aaKnown RBP7.25□□□□□ -1.25
UBE4B-209ENST00000487244 FGL2Q14314 439 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 HLA-BQ31612 363 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 INO80DQ53TQ3 878 aaPredicted RBP7.25□□□□□ -1.25
UBE4B-209ENST00000487244 ZNF805Q5CZA5 627 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 PRAMEF14Q5SWL7 426 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 FAM182AQ5T1J6 154 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 NCBP2-AS2Q69YL0 99 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 PSAPL1Q6NUJ1 521 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 RAD9BQ6WBX8 426 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 TRIM69Q86WT6 500 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 ZSWIM9Q86XI8 627 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 PGBD5Q8N414 524 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 PQLC3Q8N755 202 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 DEFB124Q8NES8 71 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 FAM71BQ8TC56 605 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 RAPGEF5Q92565 580 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 SERAC1Q96JX3 654 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 KLHL32Q96NJ5 620 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 CAMK1GQ96NX5 476 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 PANX2Q96RD6 677 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 NCAPGQ9BPX3 1015 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 CALN1Q9BXU9 219 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 GAREM1Q9H706 876 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 SP110Q9HB58 689 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 PREBQ9HCU5 417 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 DYRK4Q9NR20 520 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 AASDHPPTQ9NRN7 309 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 DNAAF2Q9NVR5 837 aaKnown RBP7.25□□□□□ -1.25
UBE4B-209ENST00000487244 IPO11Q9UI26 975 aaKnown RBP7.25□□□□□ -1.25
UBE4B-209ENST00000487244 SALL4Q9UJQ4 1053 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 ANKRD6Q9Y2G4 727 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 REXO2Q9Y3B8 237 aaKnown RBP7.25□□□□□ -1.25
UBE4B-209ENST00000487244 FADS3Q9Y5Q0 445 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 GOLGA4Q13439 2230 aaKnown RBP7.25□□□□□ -1.25
UBE4B-209ENST00000487244 ACACBO00763 2458 aa7.25□□□□□ -1.25
UBE4B-209ENST00000487244 A0A0U1RQJ8 604 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 LRRD1A4D1F6 860 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 VILLO15195 856 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 RAD51BO15315 384 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 MAFKO60675 156 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 OPHN1O60890 802 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 PALMO75781 387 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 PCDH8O95206 1070 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 KCNK5O95279 499 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 LCA5LO95447 670 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 PRKCGP05129 697 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 SYPP08247 313 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 VSIG8P0DPA2 414 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 TNNT1P13805 278 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 COMTP21964 271 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 CTSKP43235 329 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 MARCKSL1P49006 195 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 NOVA1P51513 510 aaKnown RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 ZNF135P52742 658 aaPredicted RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 ATXN3P54252 364 aaPredicted RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 CLDN2P57739 230 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 RACK1P63244 317 aaKnown RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 FAM193AP78312 1265 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 INSM1Q01101 510 aaPredicted RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 IL9RQ01113 521 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 SEMG2Q02383 582 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 GBE1Q04446 702 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 IL10RBQ08334 325 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 TEAD4Q15561 434 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 HADHQ16836 314 aaKnown RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 ANKRD20A8PQ5CZ79 823 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 NAPEPLDQ6IQ20 393 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 FBXL19Q6PCT2 694 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 GDPD4Q6W3E5 623 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 ERMP1Q7Z2K6 904 aa7.24□□□□□ -1.25
UBE4B-209ENST00000487244 ADAT2Q7Z6V5 191 aaKnown RBP7.24□□□□□ -1.25
UBE4B-209ENST00000487244 PIP4P1Q86T03 277 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms