RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 EFNA5P52803 228 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 PRKG2Q13237 762 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 MAMLD1Q13495 774 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 VEPH1Q14D04 833 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 GSTA3Q16772 222 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 SPATA1Q5VX52 437 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 HMBOX1Q6NT76 420 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 CFAP161Q6P656 301 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 FASTKD5Q7L8L6 764 aaKnown RBP3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 SLC46A3Q7Z3Q1 461 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 ANKRD13BQ86YJ7 626 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 ARFGAP1Q8N6T3 406 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 LRRC57Q8N9N7 239 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 CADM4Q8NFZ8 388 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 B4GALNT2Q8NHY0 566 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 ZPBPQ9BS86 351 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 TMX4Q9H1E5 349 aaPredicted RBP3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 MUC13Q9H3R2 512 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 WDR6Q9NNW5 1121 aaKnown RBP3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 SEL1LQ9UBV2 794 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 PLEKHB1Q9UF11 243 aaPredicted RBP3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 RAP2CQ9Y3L5 183 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 HS3ST3B1Q9Y662 390 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 NOTCH3Q9UM47 2321 aa3.72□□□□□ -1.81
SNRNP27-204ENST00000487029 A0A0G2JK05 382 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 EME2A4GXA9 379 aaPredicted RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 LRRC53A6NM62 1247 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 PTP4A3O75365 173 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 FGF2P09038 288 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 MYZAPP0CAP1 466 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 ZNF8P17098 575 aaPredicted RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 CTPS1P17812 591 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 TNFSF8P32971 234 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 RFC1P35251 1148 aaPredicted RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 GABRB2P47870 512 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 DRG2P55039 364 aaKnown RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 OLR1P78380 273 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 GAD2Q05329 585 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 TMEM115Q12893 351 aaPredicted RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 FOXD4Q12950 439 aaPredicted RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 CCNG2Q16589 344 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 HIST2H2ACQ16777 129 aaPredicted RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 ASPHD1Q5U4P2 390 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 DAB2IPQ5VWQ8 1189 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 TXNDC8Q6A555 127 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 NCAPH2Q6IBW4 605 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 KLHL24Q6TFL4 600 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 FAM83HQ6ZRV2 1179 aaPredicted RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 CCDC105Q8IYK2 499 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 CADM3Q8N126 398 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 KDM1BQ8NB78 822 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 RASSF8Q8NHQ8 419 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 CREB3L4Q8TEY5 395 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 PERPQ96FX8 193 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 ZNF333Q96JL9 665 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 H2AFJQ9BTM1 129 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 ITPAQ9BY32 194 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 B3GNT4Q9C0J1 378 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 PRKRIP1Q9H875 184 aaPredicted RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 EIF2B3Q9NR50 452 aaKnown RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 SPATS2LQ9NUQ6 558 aaKnown RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 NCKIPSDQ9NZQ3 722 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 MSRB1Q9NZV6 116 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 LIMA1Q9UHB6 759 aaKnown RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 A4GNTQ9UNA3 340 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 KCNE2Q9Y6J6 123 aa3.71□□□□□ -1.82
SNRNP27-204ENST00000487029 TTBK1Q5TCY1 1321 aaPredicted RBP3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 A6NNC1 897 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 TAF4O00268 1085 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 HSPB6O14558 160 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 DOK2O60496 412 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 MMP3P08254 477 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 CHRNB1P11230 501 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 PCNAP12004 261 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 EDN2P20800 178 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 NFKBIAP25963 317 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 MAPK4P31152 587 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 TTKP33981 857 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 RYKP34925 604 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 MLH1P40692 756 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 GNAQP50148 359 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 CLDN2P57739 230 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 MTX1Q13505 466 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 RUNX2Q13950 521 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 PPP2R5BQ15173 497 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 RNPS1Q15287 305 aaKnown RBP3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 MEA1Q16626 185 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 FAM205BPQ63HN1 556 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 TBC1D26Q86UD7 250 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 TMPRSS12Q86WS5 348 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 FAM217AQ8IXS0 508 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 KIAA2013Q8IYS2 634 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 HORMAD2Q8N7B1 307 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 MCPH1Q8NEM0 835 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 NEK9Q8TD19 979 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 USP6NLQ92738 828 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 SMARCE1Q969G3 411 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 FAM149B1Q96BN6 582 aa3.7□□□□□ -1.82
SNRNP27-204ENST00000487029 INTS12Q96CB8 462 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms