RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 PPM1HQ9ULR3 514 aa6.54□□□□□ -1.36
CTDSPL-208ENST00000486978 FZD10Q9ULW2 581 aa6.54□□□□□ -1.36
CTDSPL-208ENST00000486978 PCDHGA10Q9Y5H3 936 aa6.54□□□□□ -1.36
CTDSPL-208ENST00000486978 U3KQA8 63 aa6.54□□□□□ -1.36
CTDSPL-208ENST00000486978 DCHS2Q6V1P9 2916 aa6.54□□□□□ -1.36
CTDSPL-208ENST00000486978 NIPBLQ6KC79 2804 aaeCLIP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TBC1D3DA0A087WVF3 549 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TBC1D3IA0A087WXS9 549 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TBC1D3EA0A087X179 549 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TBC1D3KA0A087X1G2 549 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TBC1D3FA6NER0 549 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TMEM191CA6NGB0 347 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TBC1D3LB9A6J9 549 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 KPNA3O00505 521 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 DDX3XO00571 662 aaKnown RBP eCLIP6.53□□□□□ -1.362e-7■■■■□ 22.3
CTDSPL-208ENST00000486978 LATO43561 262 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 PLRG1O43660 514 aaKnown RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 CREB3O43889 395 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 RAMP2O60895 175 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 RTN2O75298 545 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 ZNF821O75541 412 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 FTLP02792 175 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 PRNPP04156 253 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 CTSLP07711 333 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TBC1D3HP0C7X1 549 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 MYBL1P10243 752 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 SKILP12757 684 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 PSMA2P25787 234 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 EPHB2P29323 1055 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 HTR7P34969 479 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 ACVRL1P37023 503 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 RECQLP46063 649 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 PPP2CBP62714 309 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 PPP2CAP67775 309 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 ARF5P84085 180 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 ZBED6P86452 979 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 CCDC15Q0P6D6 951 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 CNTN1Q12860 1018 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 ILKQ13418 452 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 MAMLD1Q13495 774 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 POLD3Q15054 466 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 INAVAQ3KP66 663 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 POM121L1PQ3SYA9 428 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TDRD12Q587J7 1177 aaKnown RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 AGBL4Q5VU57 503 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TBC1D3GQ6DHY5 549 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TBC1D3CQ6IPX1 549 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 DPY19L3Q6ZPD9 716 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 SRRM1Q8IYB3 904 aaKnown RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TBC1D3Q8IZP1 549 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 LSMEM2Q8N112 164 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 RTL3Q8N8U3 475 aaKnown RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 CHST14Q8NCH0 376 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TMIEQ8NEW7 156 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 FNIP1Q8TF40 1166 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 SYN2Q92777 582 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 ARHGEF2Q92974 986 aaKnown RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 ISG20Q96AZ6 181 aaKnown RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 SKA1Q96BD8 255 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 ZNF653Q96CK0 615 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 ATXN7L3BQ96GX2 97 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 PPP1R16AQ96I34 528 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 CCNL2Q96S94 520 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 EPAS1Q99814 870 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 ISCUQ9H1K1 167 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 SLC25A18Q9H1K4 315 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 TNKS2Q9H2K2 1166 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 PREBQ9HCU5 417 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 DYRK4Q9NR20 520 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 NDFIP2Q9NV92 336 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 UCKL1Q9NWZ5 548 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 IFNKQ9P0W0 207 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 CNOT8Q9UFF9 292 aaKnown RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 IL36AQ9UHA7 158 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 DNAI1Q9UI46 699 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 HPCAL4Q9UM19 191 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 CAPN11Q9UMQ6 739 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 BZW2Q9Y6E2 419 aaKnown RBP6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 SCINQ9Y6U3 715 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 CHD5Q8TDI0 1954 aa6.53□□□□□ -1.36
CTDSPL-208ENST00000486978 A1L4Q6 167 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 ZSCAN5CA6NGD5 496 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 WASH4PA8MWX3 477 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 EIF3CLB5ME19 914 aaKnown RBP6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 FGF10O15520 208 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 KDELR3O43731 214 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 DFNA5O60443 496 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 LEFTY1O75610 366 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 RNF8O76064 485 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 CD160O95971 181 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 SERPING1P05155 500 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 TGM2P21980 687 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 GRNP28799 593 aaKnown RBP6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 CD38P28907 300 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 TNFRSF8P28908 595 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 NUDT1P36639 197 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 DNA2P51530 1060 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 CCNHP51946 323 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 C21orf59P57076 290 aa6.52□□□□□ -1.37
CTDSPL-208ENST00000486978 YBEYP58557 167 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms