RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 UGT1A5P35504 534 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 CDK9P50750 372 aaKnown RBP12.47□□□□□ -0.41
HSPG2-211ENST00000486901 FOXA1P55317 472 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 RHDQ02161 417 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 WSCD1Q658N2 575 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 SETD3Q86TU7 594 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-211ENST00000486901 OSTM1Q86WC4 334 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 ZC3H7AQ8IWR0 971 aaKnown RBP12.47□□□□□ -0.41
HSPG2-211ENST00000486901 PDZD8Q8NEN9 1154 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 HASPINQ8TF76 798 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 OLFM1Q99784 485 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 OSBPL11Q9BXB4 747 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 PRM3Q9NNZ6 103 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 SPAG4Q9NPE6 437 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 NDFIP2Q9NV92 336 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 SLAMF8Q9P0V8 285 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 TIMM22Q9Y584 194 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 TTC3P53804 2025 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 THSD7AQ9UPZ6 1657 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 CLOCKO15516 846 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 CABYRO75952 493 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 SRP72O76094 671 aaKnown RBP12.47□□□□□ -0.41
HSPG2-211ENST00000486901 LINC00032P0C843 101 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 AFF1P51825 1210 aaKnown RBP12.47□□□□□ -0.41
HSPG2-211ENST00000486901 RPS6KA2Q15349 733 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 SLC25A52Q3SY17 297 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 TMEM214Q6NUQ4 689 aaKnown RBP12.47□□□□□ -0.41
HSPG2-211ENST00000486901 ERI1Q8IV48 349 aaKnown RBP12.47□□□□□ -0.41
HSPG2-211ENST00000486901 DNERQ8NFT8 737 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 SLC2A11Q9BYW1 496 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 TKTL2Q9H0I9 626 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 TMEM30AQ9NV96 361 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 BCAP29Q9UHQ4 241 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 CORINQ9Y5Q5 1042 aa12.47□□□□□ -0.41
HSPG2-211ENST00000486901 MEIS3P2A8K0S8 358 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 A8MU76 341 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 K7EPI3 171 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 SNAP29O95721 258 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 PRDX6P30041 224 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 ADCYAP1R1P41586 468 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 PTPN9P43378 593 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 RAB10P61026 200 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 GRB7Q14451 532 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 CYP51A1Q16850 503 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 C6orf10Q5SRN2 563 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 STXBP5Q5T5C0 1151 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 GPR158Q5T848 1215 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 ANKRD34AQ69YU3 496 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 BTLAQ7Z6A9 289 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 STYXQ8WUJ0 223 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 FAM210AQ96ND0 272 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 RANBP9Q96S59 729 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 DGCR6LQ9BY27 220 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 EPB41L1Q9H4G0 881 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 SMARCAD1Q9H4L7 1026 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 PLEKHA5Q9HAU0 1116 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 PNPLA3Q9NST1 481 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 OR12D3Q9UGF7 316 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 WARS2Q9UGM6 360 aaKnown RBP12.46□□□□□ -0.41
HSPG2-211ENST00000486901 KCTD3Q9Y597 815 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 IGKV6-21A0A0C4DH24 114 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 A0A1B0GTL3 188 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 UBFD1O14562 309 aaKnown RBP12.46□□□□□ -0.41
HSPG2-211ENST00000486901 HBP1O60381 514 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 SNRPB2P08579 225 aaKnown RBP12.46□□□□□ -0.41
HSPG2-211ENST00000486901 PIM1P11309 404 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-211ENST00000486901 CYP2B6P20813 491 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 ADRA1BP35368 520 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 IST1P53990 364 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 FOXD4Q12950 439 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-211ENST00000486901 BFSP2Q13515 415 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 VGLL4Q14135 290 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 CARM1Q86X55 608 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 EPHX4Q8IUS5 362 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 PSD4Q8NDX1 1056 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 NAT9Q9BTE0 207 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 C1orf50Q9BV19 199 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 ADI1Q9BV57 179 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 OSBPL6Q9BZF3 934 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 PRDM16Q9HAZ2 1276 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 TIMMDC1Q9NPL8 285 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 GPRC5DQ9NZD1 345 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 MPP6Q9NZW5 540 aa12.46□□□□□ -0.41
HSPG2-211ENST00000486901 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.46□□□□□ -0.42
HSPG2-211ENST00000486901 NRP2O60462 931 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 GJB3O75712 270 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 LRIG2O94898 1065 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 LGALS2P05162 132 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 FAM163BP0C2L3 166 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 IMPDH2P12268 514 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 FPGSQ05932 587 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 FBXO47Q5MNV8 452 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 PRR23BQ6ZRT6 265 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 PIWIL3Q7Z3Z3 882 aaKnown RBP12.46□□□□□ -0.42
HSPG2-211ENST00000486901 RALGPS2Q86X27 583 aaPredicted RBP12.46□□□□□ -0.42
HSPG2-211ENST00000486901 SMYD1Q8NB12 490 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 OR10Q1Q8NGQ4 319 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 ZBED3Q96IU2 234 aaPredicted RBP12.46□□□□□ -0.42
HSPG2-211ENST00000486901 B3GALT6Q96L58 329 aa12.46□□□□□ -0.42
HSPG2-211ENST00000486901 ZNF597Q96LX8 424 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms