RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 RPL21P46778 160 aaKnown RBP12.9□□□□□ -0.34
HDAC6-229ENST00000486665 CCR3P51677 355 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 METAP1P53582 386 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 COPAP53621 1224 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 WNT3AP56704 352 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 AP1S1P61966 158 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 ARHGAP8P85298 464 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 TRAF2Q12933 501 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 OLIG2Q13516 323 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 SEMA5AQ13591 1074 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 PRPSAP1Q14558 356 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 GLE1Q53GS7 698 aaKnown RBP12.9□□□□□ -0.34
HDAC6-229ENST00000486665 RALGPS1Q5JS13 557 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 EOGTQ5NDL2 527 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 ANKRD22Q5VYY1 191 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 DUPD1Q68J44 220 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 KCTD11Q693B1 232 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 KDELC2Q7Z4H8 507 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 GPR161Q8N6U8 529 aaKnown RBP12.9□□□□□ -0.34
HDAC6-229ENST00000486665 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
HDAC6-229ENST00000486665 GRIN3AQ8TCU5 1115 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 CPT1BQ92523 772 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 MRGPRX2Q96LB1 330 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 CPEB1Q9BZB8 566 aaKnown RBP12.9□□□□□ -0.34
HDAC6-229ENST00000486665 SLC6A17Q9H1V8 727 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 DPH5Q9H2P9 285 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 HAUS2Q9NVX0 235 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 IL36AQ9UHA7 158 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 FAM153AQ9UHL3 310 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 GMEB2Q9UKD1 530 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 PPM1HQ9ULR3 514 aa12.9□□□□□ -0.34
HDAC6-229ENST00000486665 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 EFCAB8A8MWE9 144 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 TRAFD1O14545 582 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 DNALI1O14645 258 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 ANXA9O76027 345 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 HEXIM1O94992 359 aaKnown RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 AGTP01019 485 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 PRLP01236 227 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 UGT2B4P06133 528 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 RHOXF2BP0C7M4 288 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 ADRA1AP35348 466 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 CXCL12P48061 93 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 GEMP55040 296 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 RPS14P62263 151 aaKnown RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 BASP1P80723 227 aaKnown RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 GUCY2DQ02846 1103 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 RAD51Q06609 339 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 BCL2L1Q07817 233 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 ELAVL3Q14576 367 aaKnown RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 CRY1Q16526 586 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 PCSK7Q16549 785 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 POM121L1PQ3SYA9 428 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 TEX35Q5T0J7 233 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 IZUMO3Q5VZ72 239 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 LAIR1Q6GTX8 287 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 GDPD4Q6W3E5 623 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 SYT13Q7L8C5 426 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 ZSWIM9Q86XI8 627 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 MMAAQ8IVH4 418 aaKnown RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 SPEM1Q8N4L4 309 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 TMIEQ8NEW7 156 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 IPMKQ8NFU5 416 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 OR2T3Q8NH03 318 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 CCHCR1Q8TD31 782 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 OR8D1Q8WZ84 308 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 LRRC45Q96CN5 670 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 KLHL32Q96NJ5 620 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 RHOXF2Q9BQY4 288 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 RSPH9Q9H1X1 276 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 SUV39H2Q9H5I1 410 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 ATP13A3Q9H7F0 1226 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 TPX2Q9ULW0 747 aaKnown RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 CHKBQ9Y259 395 aa12.89□□□□□ -0.35
HDAC6-229ENST00000486665 AAR2Q9Y312 384 aaKnown RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 V9GYY5 206 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 MYO18AQ92614 2054 aaKnown RBP12.89□□□□□ -0.35
HDAC6-229ENST00000486665 LAMA1P25391 3075 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-229ENST00000486665 LOC285095A0A1B0GVY8 99 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 ESYT3A0FGR9 886 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 ALOX15BO15296 676 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 TP73O15350 636 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 HTRA2O43464 458 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-229ENST00000486665 FZD6O60353 706 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 ATG13O75143 517 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 USP12O75317 370 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 AP2A1O95782 977 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 IL1BP01584 269 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 RETP07949 1114 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 PDHA1P08559 390 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 GRIA1P42261 906 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 MAGEA6P43360 314 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 MAPK8P45983 427 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 MPP3Q13368 585 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 SIM2Q14190 667 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-229ENST00000486665 KCNJ11Q14654 390 aa12.88□□□□□ -0.35
HDAC6-229ENST00000486665 STARD3Q14849 445 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms