RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 SUMF1Q8NBK3 374 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 TXNDC5Q8NBS9 432 aaKnown RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 FLCNQ8NFG4 579 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 IPMKQ8NFU5 416 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 RPLP0P6Q8NHW5 317 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.03□□□□□ -1.28
UBR4-214ENST00000486515 EXOC2Q96KP1 924 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 ZNF641Q96N77 438 aaPredicted RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 TBL1YQ9BQ87 522 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 TRIM51Q9BSJ1 452 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 LMAN1LQ9HAT1 526 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 USP29Q9HBJ7 922 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 ETNK1Q9HBU6 452 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 XAB2Q9HCS7 855 aaKnown RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 CACNA2D2Q9NY47 1150 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 BFARQ9NZS9 450 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 WHRNQ9P202 907 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 THAP10Q9P2Z0 257 aaPredicted RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 SLCO3A1Q9UIG8 710 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 SCML1Q9UN30 329 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 ATP8A1Q9Y2Q0 1164 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 SNX24Q9Y343 169 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 SIT1Q9Y3P8 196 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 STON1Q9Y6Q2 735 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 TENM4Q6N022 2769 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 K7EQS6 105 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 K7ERQ8 282 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 KPNA3O00505 521 aaPredicted RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 SOCS5O75159 536 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 AP2A1O95782 977 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 ADH1BP00325 375 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 MT-CO1P00395 513 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 CPP00450 1065 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 EGFP01133 1207 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 CYP2A6P11509 494 aaPredicted RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 HLA-DPA1P20036 260 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 CD72P21854 359 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 WASP42768 502 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 ITGA8P53708 1063 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 WNT3AP56704 352 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 STARD6P59095 220 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 RPL26P61254 145 aaKnown RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 PDE1BQ01064 536 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 CDH17Q12864 832 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 SEMA5AQ13591 1074 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 ARHGEF7Q14155 803 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 ATXN7L2Q5T6C5 722 aaPredicted RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 FAXCQ5TGI0 409 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 EMC10Q5UCC4 262 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 EGFLAMQ63HQ2 1017 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 ZNF776Q68DI1 518 aaPredicted RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 FSTL4Q6MZW2 842 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 FBXL19Q6PCT2 694 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 BRAT1Q6PJG6 821 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 TXNDC11Q6PKC3 985 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 USP45Q70EL2 814 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 CCDC25Q86WR0 208 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 PDCD7Q8N8D1 485 aaKnown RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 NOA1Q8NC60 698 aaKnown RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 OR6K2Q8NGY2 324 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 OR2T3Q8NH03 318 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 GRIN3AQ8TCU5 1115 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 PRCCQ92733 491 aaPredicted RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 IMP4Q96G21 291 aaKnown RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 MYO19Q96H55 970 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 LMLNQ96KR4 655 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 FMO2Q99518 471 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 OMDQ99983 421 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 IER2Q9BTL4 223 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 FICDQ9BVA6 458 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 CPEB1Q9BZB8 566 aaKnown RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 OSBPL6Q9BZF3 934 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 FOXP3Q9BZS1 431 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 TBC1D17Q9HA65 648 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 NOD2Q9HC29 1040 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 LTB4R2Q9NPC1 389 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 EIF2B3Q9NR50 452 aaKnown RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 UBP1Q9NZI7 540 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 EVLQ9UI08 416 aaPredicted RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 RPL26L1Q9UNX3 145 aaKnown RBP7.02□□□□□ -1.29
UBR4-214ENST00000486515 SHOC2Q9UQ13 582 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 RAI2Q9Y5P3 530 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 IGSF10Q6WRI0 2623 aa7.02□□□□□ -1.29
UBR4-214ENST00000486515 ABCA12Q86UK0 2595 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 MAGEB16A2A368 324 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 TMEM8BA6NDV4 472 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 C2orf81A6NN90 581 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 GOLGA8MH3BSY2 632 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 SLC30A4O14863 429 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 MAP3K13O43283 966 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 SMAD6O43541 496 aaKnown RBP7.01□□□□□ -1.29
UBR4-214ENST00000486515 PI15O43692 258 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 SIN3BO75182 1162 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 LEFTY1O75610 366 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 SEC31AO94979 1220 aaKnown RBP7.01□□□□□ -1.29
UBR4-214ENST00000486515 METTL18O95568 372 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 CRTAMO95727 393 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 PEX11BO96011 259 aa7.01□□□□□ -1.29
UBR4-214ENST00000486515 MT-CYBP00156 380 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms