RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 ARHGEF18Q6ZSZ5 1173 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 SPATA22Q8NHS9 363 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 MAGOHBQ96A72 148 aaKnown RBP20.08■□□□□ 0.81
COL6A2-208ENST00000485591 PPP1R2P1Q96PQ5 205 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 PCED1AQ9H1Q7 454 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 VPS45Q9NRW7 570 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 PCDHB9Q9Y5E1 797 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 R4GN57 208 aa20.08■□□□□ 0.81
COL6A2-208ENST00000485591 PDE2AO00408 941 aaPredicted RBP20.07■□□□□ 0.8
COL6A2-208ENST00000485591 AP1G1O43747 822 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 NDUFS2O75306 463 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 MT-CYBP00156 380 aaPredicted RBP20.07■□□□□ 0.8
COL6A2-208ENST00000485591 CPP00450 1065 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 TIMP2P16035 220 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 PSMB4P28070 264 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 KCNJ1P48048 391 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 FNTAP49354 379 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 POLR2LP62875 67 aaKnown RBP20.07■□□□□ 0.8
COL6A2-208ENST00000485591 RPL6Q02878 288 aaKnown RBP20.07■□□□□ 0.8
COL6A2-208ENST00000485591 TTC27Q6P3X3 843 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 TTC7BQ86TV6 843 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 PAF1Q8N7H5 531 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 CCDC89Q8N998 374 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 OR2T34Q8NGX1 318 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 OR14C36Q8NHC7 312 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 PDCD6IPQ8WUM4 868 aaKnown RBP20.07■□□□□ 0.8
COL6A2-208ENST00000485591 OXNAD1Q96HP4 312 aaPredicted RBP20.07■□□□□ 0.8
COL6A2-208ENST00000485591 GORASP1Q9BQQ3 440 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 GPR174Q9BXC1 333 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 FAM153AQ9UHL3 310 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 FADS3Q9Y5Q0 445 aa20.07■□□□□ 0.8
COL6A2-208ENST00000485591 LRRC72A6NJI9 287 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 C10orf142B7Z368 130 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 AREL1O15033 823 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 SPINT1O43278 529 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 MAP3K13O43283 966 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 ANXA9O76027 345 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 IFNB1P01574 187 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 XPAP23025 273 aaPredicted RBP20.06■□□□□ 0.8
COL6A2-208ENST00000485591 ACTN2P35609 894 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 COILP38432 576 aaPredicted RBP20.06■□□□□ 0.8
COL6A2-208ENST00000485591 RPL26P61254 145 aaKnown RBP20.06■□□□□ 0.8
COL6A2-208ENST00000485591 LMNB2Q03252 620 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 MPP3Q13368 585 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 SIM2Q14190 667 aaPredicted RBP20.06■□□□□ 0.8
COL6A2-208ENST00000485591 LRRK1Q38SD2 2015 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 PMS2CLQ68D20 193 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 CCDC137Q6PK04 289 aaKnown RBP20.06■□□□□ 0.8
COL6A2-208ENST00000485591 KDELC1Q6UW63 502 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 CEP68Q76N32 757 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 CADM4Q8NFZ8 388 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 ATL2Q8NHH9 583 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 ATOH1Q92858 354 aaPredicted RBP20.06■□□□□ 0.8
COL6A2-208ENST00000485591 ZC3H10Q96K80 434 aaKnown RBP20.06■□□□□ 0.8
COL6A2-208ENST00000485591 EPC1Q9H2F5 836 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 PCDH9Q9HC56 1237 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 PREBQ9HCU5 417 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 PHTF1Q9UMS5 762 aa20.06■□□□□ 0.8
COL6A2-208ENST00000485591 RPL26L1Q9UNX3 145 aaKnown RBP20.06■□□□□ 0.8
COL6A2-208ENST00000485591 ARIH1Q9Y4X5 557 aaPredicted RBP20.06■□□□□ 0.8
COL6A2-208ENST00000485591 ABCA7Q8IZY2 2146 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 F5H423 210 aaPredicted RBP20.05■□□□□ 0.8
COL6A2-208ENST00000485591 PRLP01236 227 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 PDHA1P08559 390 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 GEMP55040 296 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 ELP6Q0PNE2 266 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 PRPSAP1Q14558 356 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 PARP6Q2NL67 630 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 PLK5Q496M5 336 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 LRRC73Q5JTD7 316 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 SPDYCQ5MJ68 293 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 NEK5Q6P3R8 708 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 LPCAT2Q7L5N7 544 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 GSTA5Q7RTV2 222 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 KLHDC8BQ8IXV7 354 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 GLIS1Q8NBF1 620 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 PIH1D2Q8WWB5 315 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 ZNF592Q92610 1267 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 TRIB3Q96RU7 358 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 MLPHQ9BV36 600 aaPredicted RBP20.05■□□□□ 0.8
COL6A2-208ENST00000485591 DUSP15Q9H1R2 295 aaPredicted RBP20.05■□□□□ 0.8
COL6A2-208ENST00000485591 PCDH12Q9NPG4 1184 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 UBP1Q9NZI7 540 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 CHKBQ9Y259 395 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 AAR2Q9Y312 384 aaKnown RBP20.05■□□□□ 0.8
COL6A2-208ENST00000485591 PPIL1Q9Y3C6 166 aa20.05■□□□□ 0.8
COL6A2-208ENST00000485591 CCDC188H7C350 402 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 RIOK3O14730 519 aaKnown RBP20.04■□□□□ 0.8
COL6A2-208ENST00000485591 TSPAN6O43657 245 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 PMPCBO75439 489 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 METTL18O95568 372 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 NFKBIAP25963 317 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 DEKP35659 375 aaKnown RBP20.04■□□□□ 0.8
COL6A2-208ENST00000485591 MMP12P39900 470 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 GRIA4P48058 902 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 CDK18Q07002 472 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 ELF2Q15723 593 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 PCSK7Q16549 785 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 ERAP2Q6P179 960 aa20.04■□□□□ 0.8
COL6A2-208ENST00000485591 FEM1CQ96JP0 617 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms