RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 HIC2Q96JB3 615 aa13.41□□□□□ -0.26
UBA3-210ENST00000485424 ZNF578Q96N58 590 aaPredicted RBP13.41□□□□□ -0.26
UBA3-210ENST00000485424 C1QTNF2Q9BXJ5 285 aa13.41□□□□□ -0.26
UBA3-210ENST00000485424 SLC13A1Q9BZW2 595 aa13.41□□□□□ -0.26
UBA3-210ENST00000485424 SPASTQ9UBP0 616 aa13.41□□□□□ -0.26
UBA3-210ENST00000485424 UBA2Q9UBT2 640 aaPredicted RBP13.41□□□□□ -0.26
UBA3-210ENST00000485424 APOBEC3BQ9UH17 382 aaKnown RBP13.41□□□□□ -0.26
UBA3-210ENST00000485424 GGT7Q9UJ14 662 aa13.41□□□□□ -0.26
UBA3-210ENST00000485424 CSNK1G3Q9Y6M4 447 aa13.41□□□□□ -0.26
UBA3-210ENST00000485424 CPED1A4D0V7 1026 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 ARHGAP42A6NI28 874 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 TMCO5BA8MYB1 307 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 TOR1BO14657 336 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 LZTS3O60299 673 aaPredicted RBP13.4□□□□□ -0.26
UBA3-210ENST00000485424 MMP20O60882 483 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 USP12O75317 370 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 CSO75390 466 aaKnown RBP13.4□□□□□ -0.26
UBA3-210ENST00000485424 RNF8O76064 485 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
UBA3-210ENST00000485424 ANXA6P08133 673 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 PLA2G2AP14555 144 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 PSMA2P25787 234 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 HTR7P34969 479 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 RPIAP49247 311 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 RPL7AP62424 266 aaKnown RBP13.4□□□□□ -0.26
UBA3-210ENST00000485424 SERINC3Q13530 473 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 CDKN3Q16667 212 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 MCOLN2Q8IZK6 566 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 HMCESQ96FZ2 354 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 NAF1Q96HR8 494 aaKnown RBP13.4□□□□□ -0.26
UBA3-210ENST00000485424 EXOC2Q96KP1 924 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 WRAP53Q9BUR4 548 aaKnown RBP13.4□□□□□ -0.26
UBA3-210ENST00000485424 PARVAQ9NVD7 372 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 AP4E1Q9UPM8 1137 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 NEU3Q9UQ49 428 aa13.4□□□□□ -0.26
UBA3-210ENST00000485424 TLN1Q9Y490 2541 aaKnown RBP13.4□□□□□ -0.26
UBA3-210ENST00000485424 NAV2Q8IVL1 2488 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 SMTNL1A8MU46 457 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 WASH4PA8MWX3 477 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 EEF2KO00418 725 aaKnown RBP13.39□□□□□ -0.27
UBA3-210ENST00000485424 CTSEP14091 401 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 BLKP51451 505 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 SUOXP51687 545 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 PFN3P60673 137 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 YPEL5P62699 121 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 NR0B2Q15466 257 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 KLHL40Q2TBA0 621 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 DEFB133Q30KQ1 61 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 PRRT3Q5FWE3 981 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 ESRP1Q6NXG1 681 aaKnown RBP13.39□□□□□ -0.27
UBA3-210ENST00000485424 ERAP2Q6P179 960 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 PHACTR4Q8IZ21 702 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 LSMEM2Q8N112 164 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 NETO2Q8NC67 525 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 VCPIP1Q96JH7 1222 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 KLF6Q99612 283 aaPredicted RBP13.39□□□□□ -0.27
UBA3-210ENST00000485424 CPEB1Q9BZB8 566 aaKnown RBP13.39□□□□□ -0.27
UBA3-210ENST00000485424 DHX35Q9H5Z1 703 aaKnown RBP13.39□□□□□ -0.27
UBA3-210ENST00000485424 SYNDIG1Q9H7V2 258 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 POLR1BQ9H9Y6 1135 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 SP110Q9HB58 689 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 ASCL3Q9NQ33 180 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 DKK3Q9UBP4 350 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 KLF15Q9UIH9 416 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 SALL4Q9UJQ4 1053 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 MFHAS1Q9Y4C4 1052 aa13.39□□□□□ -0.27
UBA3-210ENST00000485424 BSNQ9UPA5 3926 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 LRRC10BA6NIK2 292 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 EIF3CLB5ME19 914 aaKnown RBP13.38□□□□□ -0.27
UBA3-210ENST00000485424 ERVH48-1M5A8F1 160 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 TPP1O14773 563 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 AREL1O15033 823 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 PIGNO95427 931 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 TGM2P21980 687 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 HTR1BP28222 390 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 IGFALSP35858 605 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 EIF4A3P38919 411 aaKnown RBP13.38□□□□□ -0.27
UBA3-210ENST00000485424 LSSP48449 732 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 NDST2P52849 883 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 TMPRSS3P57727 454 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 PPARDQ03181 441 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 TYRO3Q06418 890 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 ASIC2Q16515 512 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 TPRG1LQ5T0D9 272 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 ERMARDQ5T6L9 678 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 BROXQ5VW32 411 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 MACC1Q6ZN28 852 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 EFL1Q7Z2Z2 1120 aaKnown RBP13.38□□□□□ -0.27
UBA3-210ENST00000485424 UMODL1-AS1Q8N2C9 162 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 ATL2Q8NHH9 583 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
UBA3-210ENST00000485424 CENPTQ96BT3 561 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 EIF3CQ99613 913 aaKnown RBP13.38□□□□□ -0.27
UBA3-210ENST00000485424 CINPQ9BW66 212 aaPredicted RBP13.38□□□□□ -0.27
UBA3-210ENST00000485424 KLC2Q9H0B6 622 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 SUV39H2Q9H5I1 410 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 NOL6Q9H6R4 1146 aaKnown RBP13.38□□□□□ -0.27
UBA3-210ENST00000485424 CPNE5Q9HCH3 593 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 MYO6Q9UM54 1294 aa13.38□□□□□ -0.27
UBA3-210ENST00000485424 PTPN13Q12923 2485 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms