RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ATXN7O15265 892 aaPredicted RBP11.57□□□□□ -0.56
SCFD1-206ENST00000484733 USP12O75317 370 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 TCEA3O75764 348 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 ANXA6P08133 673 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 ITIH2P19823 946 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 EIF4A3P38919 411 aaKnown RBP11.57□□□□□ -0.56
SCFD1-206ENST00000484733 BLKP51451 505 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 ZNF135P52742 658 aaPredicted RBP11.57□□□□□ -0.56
SCFD1-206ENST00000484733 ADKP55263 362 aaKnown RBP11.57□□□□□ -0.56
SCFD1-206ENST00000484733 PCBP4P57723 403 aaKnown RBP11.57□□□□□ -0.56
SCFD1-206ENST00000484733 TPI1P60174 286 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 GABREP78334 506 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 TLE3Q04726 772 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 MAMLD1Q13495 774 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 KLHL40Q2TBA0 621 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 GUSBP11Q6P575 273 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 BRAT1Q6PJG6 821 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 PSTKQ8IV42 348 aaKnown RBP11.57□□□□□ -0.56
SCFD1-206ENST00000484733 NAT6Q93015 286 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 NCAPGQ9BPX3 1015 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 LRRC61Q9BV99 259 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 SLC13A1Q9BZW2 595 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 TCEAL2Q9H3H9 227 aaPredicted RBP11.57□□□□□ -0.56
SCFD1-206ENST00000484733 PNMA8BQ9ULN7 279 aaPredicted RBP11.57□□□□□ -0.56
SCFD1-206ENST00000484733 ARHGAP42A6NI28 874 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 GCATO75600 419 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 ATP1A3P13637 1013 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 TGM2P21980 687 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 XPAP23025 273 aaPredicted RBP11.57□□□□□ -0.56
SCFD1-206ENST00000484733 PPARDQ03181 441 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 RFTN1Q14699 578 aaPredicted RBP11.57□□□□□ -0.56
SCFD1-206ENST00000484733 LRRC14Q15048 493 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 IRF4Q15306 451 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 CDKN3Q16667 212 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 UGP2Q16851 508 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 WSCD2Q2TBF2 565 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 ERMARDQ5T6L9 678 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 FAXCQ5TGI0 409 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 SPACA3Q8IXA5 215 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 RBFAQ8N0V3 343 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 ATL2Q8NHH9 583 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 FNIP1Q8TF40 1166 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 SLC39A8Q9C0K1 460 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 CLPBQ9H078 707 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 AP4E1Q9UPM8 1137 aa11.57□□□□□ -0.56
SCFD1-206ENST00000484733 LRRK1Q38SD2 2015 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 TEX51A0A1B0GUA7 166 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 CPED1A4D0V7 1026 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 EIF4E1BA6NMX2 242 aaKnown RBP11.56□□□□□ -0.56
SCFD1-206ENST00000484733 J3KR12 359 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 BUB1BO60566 1050 aaPredicted RBP11.56□□□□□ -0.56
SCFD1-206ENST00000484733 PIGNO95427 931 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 ANP32AP39687 249 aaKnown RBP11.56□□□□□ -0.56
SCFD1-206ENST00000484733 MLLT3P42568 568 aaPredicted RBP11.56□□□□□ -0.56
SCFD1-206ENST00000484733 HCAR3P49019 387 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 NSUN2Q08J23 767 aaKnown RBP eCLIP11.56□□□□□ -0.56
SCFD1-206ENST00000484733 CCDC173Q0VFZ6 552 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 PRRT3Q5FWE3 981 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 LRRC73Q5JTD7 316 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 CCDC183Q5T5S1 534 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 ERAP2Q6P179 960 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 RBM44Q6ZP01 1051 aaKnown RBP11.56□□□□□ -0.56
SCFD1-206ENST00000484733 SRLQ86TD4 932 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 SLC35F3Q8IY50 421 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 BPIFA3Q9BQP9 254 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 WRAP53Q9BUR4 548 aaKnown RBP11.56□□□□□ -0.56
SCFD1-206ENST00000484733 APOOQ9BUR5 198 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 PCDH12Q9NPG4 1184 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 ASCL3Q9NQ33 180 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 RTN4Q9NQC3 1192 aaKnown RBP11.56□□□□□ -0.56
SCFD1-206ENST00000484733 TAS2R14Q9NYV8 317 aa11.56□□□□□ -0.56
SCFD1-206ENST00000484733 TMEM191CA6NGB0 347 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 GOLGA6L22H0YM25 854 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 EEF2KO00418 725 aaKnown RBP11.55□□□□□ -0.56
SCFD1-206ENST00000484733 YY2O15391 372 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 MBD3O95983 291 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 MPOP05164 745 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 HOXC4P09017 264 aaPredicted RBP11.55□□□□□ -0.56
SCFD1-206ENST00000484733 ALPIP09923 528 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 GZMAP12544 262 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 C6P13671 934 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 TSHRP16473 764 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 PSMA2P25787 234 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 PAPOLAP51003 745 aaKnown RBP11.55□□□□□ -0.56
SCFD1-206ENST00000484733 UCNP55089 124 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 MTM1Q13496 603 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 NFATC4Q14934 902 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 ELOCQ15369 112 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 PERM1Q5SV97 790 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 ESRP1Q6NXG1 681 aaKnown RBP11.55□□□□□ -0.56
SCFD1-206ENST00000484733 GPR155Q7Z3F1 870 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 ARFGAP1Q8N6T3 406 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 NETO2Q8NC67 525 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 FCRL3Q96P31 734 aaPredicted RBP11.55□□□□□ -0.56
SCFD1-206ENST00000484733 DPH1Q9BZG8 443 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 EDEM3Q9BZQ6 932 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 AIPL1Q9NZN9 384 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 PADI4Q9UM07 663 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 SSUH2Q9Y2M2 353 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 ATP8A1Q9Y2Q0 1164 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms