RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CHAF1AQ13111 956 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-207ENST00000484275 CUL4BQ13620 913 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 TIGD6Q17RP2 521 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 MAP9Q49MG5 647 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 LNX1Q8TBB1 728 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-207ENST00000484275 CREB3L4Q8TEY5 395 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 TMEM170AQ8WVE7 144 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 FIG4Q92562 907 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 TANKQ92844 425 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 CCDC136Q96JN2 1154 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 NPLQ9BXD5 320 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-207ENST00000484275 TWSG1Q9GZX9 223 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 NDRG3Q9UGV2 375 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 SIX4Q9UIU6 781 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 KCNS2Q9ULS6 477 aa4.37□□□□□ -1.71
SCAF11-207ENST00000484275 FAM172BPA6NC97 362 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 MID1O15344 667 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 DHX16O60231 1041 aaKnown RBP4.36□□□□□ -1.71
SCAF11-207ENST00000484275 RGS11O94810 467 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 APOHP02749 345 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-207ENST00000484275 AMBPP02760 352 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 GM2AP17900 193 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 SRD5A1P18405 259 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 MARK3P27448 753 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 RYKP34925 604 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 MCM2P49736 904 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 OASLQ15646 514 aaKnown RBP4.36□□□□□ -1.71
SCAF11-207ENST00000484275 SLC18A3Q16572 532 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 TRMT1LQ7Z2T5 733 aaKnown RBP4.36□□□□□ -1.71
SCAF11-207ENST00000484275 ERGIC1Q969X5 290 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 CHODLQ9H9P2 273 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 CYSLTR2Q9NS75 346 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 CNPY2Q9Y2B0 182 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 CGNL1Q0VF96 1302 aa4.36□□□□□ -1.71
SCAF11-207ENST00000484275 A0A0G2JPF8 293 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 HNRNPCL3B7ZW38 293 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 STX16-NPEPL1H3BU86 382 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 EBAG9O00559 213 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 STX16O14662 325 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 ZIC3O60481 467 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 HNRNPCL1O60812 293 aaKnown RBP4.35□□□□□ -1.71
SCAF11-207ENST00000484275 NDUFS7O75251 213 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 SLC22A3O75751 556 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 HNRNPCL4P0DMR1 293 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 FGF5P12034 268 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 VEGFAP15692 232 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-207ENST00000484275 TNFAIP1Q13829 316 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 CBWD5Q5RIA9 395 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 CHD1LQ86WJ1 897 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 EPHX4Q8IUS5 362 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 DNAAF1Q8NEP3 725 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 HSPH1Q92598 858 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 TTC14Q96N46 770 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 CLSTN3Q9BQT9 956 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 GFRA4Q9GZZ7 299 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 TTC12Q9H892 705 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-207ENST00000484275 ENTPD7Q9NQZ7 604 aa4.35□□□□□ -1.71
SCAF11-207ENST00000484275 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.34□□□□□ -1.71
SCAF11-207ENST00000484275 CBY3A6NI87 242 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 ATP2C2O75185 946 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 FAM155BO75949 473 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 ITGAXP20702 1163 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 TIMP3P35625 211 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 ECT2LQ008S8 904 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 SOWAHAQ2M3V2 549 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 AMZ1Q400G9 498 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 C14orf177Q52M58 125 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 ESCO2Q56NI9 601 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 HSP90AB2PQ58FF8 381 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 FAM83BQ5T0W9 1011 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 PLA2G4FQ68DD2 849 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 CCSAPQ6IQ19 270 aaPredicted RBP4.34□□□□□ -1.71
SCAF11-207ENST00000484275 PRSS45Q7RTY3 260 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 SFR1Q86XK3 245 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 LURAP1LQ8IV03 231 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 GDPD5Q8WTR4 605 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 MMTAG2Q9BU76 263 aaKnown RBP4.34□□□□□ -1.71
SCAF11-207ENST00000484275 KRTAP4-4Q9BYR3 166 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 LMAN2LQ9H0V9 348 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 IFT80Q9P2H3 777 aaPredicted RBP4.34□□□□□ -1.71
SCAF11-207ENST00000484275 CDC14AQ9UNH5 594 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 VDAC3Q9Y277 283 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 PSAT1Q9Y617 370 aa4.34□□□□□ -1.71
SCAF11-207ENST00000484275 FGF17O60258 216 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 VEGFCP49767 419 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 TAF6P49848 677 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 ATP12AP54707 1039 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 HDAC4P56524 1084 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 LINC01547P58512 204 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-207ENST00000484275 BLMHQ13867 455 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 CCDC38Q502W7 563 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 C19orf48Q6RUI8 117 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 DSG4Q86SJ6 1040 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 SLC9B2Q86UD5 537 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 CTCFLQ8NI51 663 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-207ENST00000484275 TMEM19Q96HH6 336 aa4.33□□□□□ -1.72
SCAF11-207ENST00000484275 FBRSL1Q9HCM7 1045 aaKnown RBP4.33□□□□□ -1.72
SCAF11-207ENST00000484275 C1RLQ9NZP8 487 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms