RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 SALL4Q9UJQ4 1053 aa20.05■□□□□ 0.8
HPS4-213ENST00000483631 LAMA5O15230 3695 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 TMEM110-MUSTN1A8MSY1 372 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 J3KR12 359 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 INSIG1O15503 277 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 AQP9O43315 295 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 MMP20O60882 483 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 JUNDP17535 347 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 IGFALSP35858 605 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 IL10RBQ08334 325 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 EIF2B5Q13144 721 aaKnown RBP20.04■□□□□ 0.8
HPS4-213ENST00000483631 DPYSL2Q16555 572 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 KLHL40Q2TBA0 621 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 BOLA3Q53S33 107 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 ZNF542PQ5EBM4 170 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 TMCO4Q5TGY1 634 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 ERAP2Q6P179 960 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 MACC1Q6ZN28 852 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 VPS36Q86VN1 386 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 ARHGAP12Q8IWW6 846 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 TP53I13Q8NBR0 393 aaPredicted RBP20.04■□□□□ 0.8
HPS4-213ENST00000483631 CELF6Q96J87 481 aaKnown RBP20.04■□□□□ 0.8
HPS4-213ENST00000483631 EXOC2Q96KP1 924 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 ATP13A3Q9H7F0 1226 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 ZWILCHQ9H900 591 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 SPASTQ9UBP0 616 aa20.04■□□□□ 0.8
HPS4-213ENST00000483631 LY6G6EA0A0G2JKS1 128 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 LZTS3O60299 673 aaPredicted RBP20.03■□□□□ 0.8
HPS4-213ENST00000483631 PALMO75781 387 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 SERPINA4P29622 427 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 PBX1P40424 430 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 DPYSQ14117 519 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 TPRG1LQ5T0D9 272 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 CFAP58Q5T655 872 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 CDCP2Q5VXM1 449 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 SRLQ86TD4 932 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 SPOCK2Q92563 424 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 ZNF599Q96NL3 588 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 TRIM7Q9C029 511 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 SP110Q9HB58 689 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 KLF15Q9UIH9 416 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 U3KQA8 63 aa20.03■□□□□ 0.8
HPS4-213ENST00000483631 ITPR1Q14643 2758 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 OPA1O60313 960 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 PIGNO95427 931 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 MT-CO3P00414 261 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 MMP12P39900 470 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 BLKP51451 505 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 RENBPP51606 427 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 PIGHQ14442 188 aaPredicted RBP20.02■□□□□ 0.8
HPS4-213ENST00000483631 LRRC14Q15048 493 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 PPP6R3Q5H9R7 873 aaPredicted RBP20.02■□□□□ 0.8
HPS4-213ENST00000483631 LRRC73Q5JTD7 316 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 HGSNATQ68CP4 663 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 SDR16C5Q8N3Y7 309 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 NETO2Q8NC67 525 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 ECHDC3Q96DC8 303 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 PSKH2Q96QS6 385 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 CINPQ9BW66 212 aaPredicted RBP20.02■□□□□ 0.8
HPS4-213ENST00000483631 PCDH12Q9NPG4 1184 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 CWC15Q9P013 229 aaKnown RBP20.02■□□□□ 0.8
HPS4-213ENST00000483631 ATP8A1Q9Y2Q0 1164 aa20.02■□□□□ 0.8
HPS4-213ENST00000483631 RP1P56715 2156 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 LMO7DNF2Z398 122 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 H3BRJ5 948 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 BUB1BO60566 1050 aaPredicted RBP20.01■□□□□ 0.79
HPS4-213ENST00000483631 NEBLO76041 1014 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 SKILP12757 684 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 EIF4A3P38919 411 aaKnown RBP20.01■□□□□ 0.79
HPS4-213ENST00000483631 ARL4AP40617 200 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 CLDN6P56747 220 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 AP1S1P61966 158 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 POLR2LP62875 67 aaKnown RBP20.01■□□□□ 0.79
HPS4-213ENST00000483631 FANCCQ00597 558 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 PHACTR4Q8IZ21 702 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 NPWQ8N729 165 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 NIPA2Q8N8Q9 360 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 TSEN2Q8NCE0 465 aaKnown RBP20.01■□□□□ 0.79
HPS4-213ENST00000483631 TPCN2Q8NHX9 752 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 TEKT4Q8WW24 435 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 GLMNQ92990 594 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 GRAMD1AQ96CP6 724 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 DEPDC7Q96QD5 511 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 IL12RB2Q99665 862 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 WRAP53Q9BUR4 548 aaKnown RBP20.01■□□□□ 0.79
HPS4-213ENST00000483631 BOCQ9BWV1 1114 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 SLC13A1Q9BZW2 595 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 CBX8Q9HC52 389 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 MBNL1Q9NR56 388 aaKnown RBP20.01■□□□□ 0.79
HPS4-213ENST00000483631 SEPT3Q9UH03 358 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 APOBEC3BQ9UH17 382 aaKnown RBP20.01■□□□□ 0.79
HPS4-213ENST00000483631 RALYQ9UKM9 306 aaKnown RBP20.01■□□□□ 0.79
HPS4-213ENST00000483631 AK5Q9Y6K8 562 aa20.01■□□□□ 0.79
HPS4-213ENST00000483631 CELSR3Q9NYQ7 3312 aa20■□□□□ 0.79
HPS4-213ENST00000483631 A0A1W2PQ67 120 aa20■□□□□ 0.79
HPS4-213ENST00000483631 EME2A4GXA9 379 aaPredicted RBP20■□□□□ 0.79
HPS4-213ENST00000483631 SERPING1P05155 500 aa20■□□□□ 0.79
HPS4-213ENST00000483631 C6P13671 934 aa20■□□□□ 0.79
HPS4-213ENST00000483631 ITIH2P19823 946 aa20■□□□□ 0.79
HPS4-213ENST00000483631 HSPA9P38646 679 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms