RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 RNF25Q96BH1 459 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 ZNF830Q96NB3 372 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 LENG8Q96PV6 779 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 MAK16Q9BXY0 300 aaKnown RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 SLC17A9Q9BYT1 436 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 GAREM1Q9H706 876 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 ITM2BQ9Y287 266 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 FNDC3AQ9Y2H6 1198 aaKnown RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 PCDHGB2Q9Y5G2 931 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 SPTBN2O15020 2390 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 A0A1W2PQ67 120 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 TLR4O00206 839 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 DFNA5O60443 496 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 TNNT1P13805 278 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 CD59P13987 128 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 PRLRP16471 622 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 AKT2P31751 481 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 CTNNA1P35221 906 aaKnown RBP18.16■□□□□ 0.5
HDAC6-225ENST00000483506 MARCKSL1P49006 195 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 NXPH1P58417 271 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 UAP1L1Q3KQV9 507 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 ODF2Q5BJF6 829 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 SPOCD1Q6ZMY3 1216 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 DBX2Q6ZNG2 339 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 RCOR2Q8IZ40 523 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 DENND6BQ8NEG7 585 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 EXD1Q8NHP7 514 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 KRT35Q92764 455 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 KLF6Q99612 283 aaPredicted RBP18.16■□□□□ 0.5
HDAC6-225ENST00000483506 DESI2Q9BSY9 194 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 ERVMER34-1Q9H9K5 563 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 IL21RQ9HBE5 538 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 HS3ST3A1Q9Y663 406 aa18.16■□□□□ 0.5
HDAC6-225ENST00000483506 GRID2IPA4D2P6 1211 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 IGLON5A6NGN9 336 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 PCNX2A6NKB5 2137 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 NEMP1O14524 444 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 RIOK3O14730 519 aaKnown RBP18.15■□□□□ 0.5
HDAC6-225ENST00000483506 SLC31A1O15431 190 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 MAGEC1O60732 1142 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 ZRANB2O95218 330 aaKnown RBP eCLIP18.15■□□□□ 0.5
HDAC6-225ENST00000483506 CES1P23141 567 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 CTNNA2P26232 953 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 MMP12P39900 470 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 NR2C2P49116 596 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 KIF5AQ12840 1032 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 TFDP2Q14188 446 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 STAT4Q14765 748 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 PPP2R5EQ16537 467 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 TFDP3Q5H9I0 405 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 LRRC73Q5JTD7 316 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 GCNT7Q6ZNI0 430 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 ABI3BPQ7Z7G0 1075 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 RFX6Q8HWS3 928 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 CCDC13Q8IYE1 715 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 CCDC112Q8NEF3 446 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 KLK6Q92876 244 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 RBM41Q96IZ5 413 aaKnown RBP18.15■□□□□ 0.5
HDAC6-225ENST00000483506 POLR1EQ9GZS1 481 aaKnown RBP18.15■□□□□ 0.5
HDAC6-225ENST00000483506 BRD8Q9H0E9 1235 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 NOD2Q9HC29 1040 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 PCDH12Q9NPG4 1184 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 SCUBE2Q9NQ36 999 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 GPR27Q9NS67 375 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 ATP8A1Q9Y2Q0 1164 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 PCDHA3Q9Y5H8 950 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 LRRK1Q38SD2 2015 aa18.15■□□□□ 0.5
HDAC6-225ENST00000483506 hCG_1818297A0A087WSY0 165 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 CFAP69A5D8W1 941 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 H0Y8X5 98 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 ARHGAP6O43182 974 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 PCDHGA12O60330 932 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 KCNK5O95279 499 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 CCNB1P14635 433 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 XPAP23025 273 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-225ENST00000483506 COPS2P61201 443 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 MAXP61244 160 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 POLR2LP62875 67 aaKnown RBP18.14■□□□□ 0.49
HDAC6-225ENST00000483506 IFI35P80217 286 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-225ENST00000483506 AGERQ15109 404 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 PDK1Q15118 436 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 CFAP58Q5T655 872 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 ERAP2Q6P179 960 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 SPATS2Q86XZ4 545 aaKnown RBP18.14■□□□□ 0.49
HDAC6-225ENST00000483506 KIAA1524Q8TCG1 905 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 LGMNQ99538 433 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 IL12RB2Q99665 862 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 NT5MQ9NPB1 228 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 GDF3Q9NR23 364 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 TM7SF3Q9NS93 570 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 HAUS2Q9NVX0 235 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 RBM22Q9NW64 420 aaKnown RBP eCLIP18.14■□□□□ 0.49
HDAC6-225ENST00000483506 CA5BQ9Y2D0 317 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 HEY1Q9Y5J3 304 aa18.14■□□□□ 0.49
HDAC6-225ENST00000483506 NCOR2Q9Y618 2525 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 A0A1B0GTQ1 180 aa18.13■□□□□ 0.49
HDAC6-225ENST00000483506 TTC24A2A3L6 582 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-225ENST00000483506 CCDC66A2RUB6 948 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms