RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 EBF2Q9HAK2 575 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 CAPN10Q9HC96 672 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 TM9SF3Q9HD45 589 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 TTLL3Q9Y4R7 772 aa21.11■□□□□ 0.97
SEC13-217ENST00000482647 LNP1A1A4G5 178 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 APOC4-APOC2K7ER74 178 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 AREL1O15033 823 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 SOCS5O75159 536 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 APOC2P02655 101 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 SYPP08247 313 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 RACK1P63244 317 aaKnown RBP21.1■□□□□ 0.97
SEC13-217ENST00000482647 ZNF284Q2VY69 593 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 ERAP2Q6P179 960 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 ECHDC3Q96DC8 303 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 SERAC1Q96JX3 654 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 IL12RB2Q99665 862 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 ATP8A1Q9Y2Q0 1164 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 PCDHGC4Q9Y5F7 938 aa21.1■□□□□ 0.97
SEC13-217ENST00000482647 UPK3BL1B0FP48 263 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 UPK3BL2E5RIL1 263 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 TRAFD1O14545 582 aaPredicted RBP21.09■□□□□ 0.97
SEC13-217ENST00000482647 ELP6Q0PNE2 266 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 ZNF211Q13398 564 aaPredicted RBP21.09■□□□□ 0.97
SEC13-217ENST00000482647 PRKD1Q15139 912 aaPredicted RBP21.09■□□□□ 0.97
SEC13-217ENST00000482647 TMEM259Q4ZIN3 620 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 ALG1LQ6GMV1 187 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 ZC3H18Q86VM9 953 aaKnown RBP21.09■□□□□ 0.97
SEC13-217ENST00000482647 TRIM58Q8NG06 486 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 SKA1Q96BD8 255 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 HAUS1Q96CS2 278 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 NSMCE3Q96MG7 304 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 ZDHHC5Q9C0B5 715 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 PCDH12Q9NPG4 1184 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 AASDHPPTQ9NRN7 309 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 SEPT10Q9P0V9 454 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 SLCO1B1Q9Y6L6 691 aa21.09■□□□□ 0.97
SEC13-217ENST00000482647 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.08■□□□□ 0.97
SEC13-217ENST00000482647 HACD1B0YJ81 288 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 PRAMEF26H0Y7S4 382 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 ARHGAP33O14559 1287 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 ZSCAN12O43309 604 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 MTSS1O43312 755 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 HTRA2O43464 458 aaPredicted RBP21.08■□□□□ 0.97
SEC13-217ENST00000482647 HLA-DQB2P05538 268 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 ENGP17813 658 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 GRIA4P48058 902 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 CSNK1EP49674 416 aaKnown RBP21.08■□□□□ 0.97
SEC13-217ENST00000482647 ATXN3P54252 364 aaPredicted RBP21.08■□□□□ 0.97
SEC13-217ENST00000482647 SGCGQ13326 291 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 XRCC4Q13426 336 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 RPS6KA1Q15418 735 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 SLC45A4Q5BKX6 768 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 LRRC73Q5JTD7 316 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 MEI1Q5TIA1 1274 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 SEL1L3Q68CR1 1132 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 NAPEPLDQ6IQ20 393 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 AADACL2Q6P093 401 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 B4GALNT4Q76KP1 1039 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 ADAT2Q7Z6V5 191 aaKnown RBP21.08■□□□□ 0.97
SEC13-217ENST00000482647 ZSWIM9Q86XI8 627 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 PDCD6IPQ8WUM4 868 aaKnown RBP21.08■□□□□ 0.97
SEC13-217ENST00000482647 SPOCK2Q92563 424 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 SLC6A18Q96N87 628 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 EDEM2Q9BV94 578 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 SLC17A9Q9BYT1 436 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 KCNF1Q9H3M0 494 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 RXFP3Q9NSD7 469 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 ZFR2Q9UPR6 939 aaKnown RBP21.08■□□□□ 0.97
SEC13-217ENST00000482647 ITM2BQ9Y287 266 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 RAI2Q9Y5P3 530 aa21.08■□□□□ 0.97
SEC13-217ENST00000482647 DMXL1Q9Y485 3027 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 GOLGA6L9A6NEM1 432 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 IGLON5A6NGN9 336 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 RIOK3O14730 519 aaKnown RBP21.07■□□□□ 0.96
SEC13-217ENST00000482647 SLC31A1O15431 190 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 SPINT1O43278 529 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 GDF9O60383 454 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 PRLRP16471 622 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 ITIH2P19823 946 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 NFKBIAP25963 317 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 DSC2Q02487 901 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 ZBTB17Q13105 803 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 STAT4Q14765 748 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 TMEM52BQ4KMG9 183 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.07■□□□□ 0.96
SEC13-217ENST00000482647 CNTD1Q8N815 330 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 ARRDC2Q8TBH0 407 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 CXorf40AQ8TE69 158 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 KLK6Q92876 244 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 AGAP3Q96P47 875 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 FERMT1Q9BQL6 677 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 HERPUD2Q9BSE4 406 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 GTPBP2Q9BX10 602 aaKnown RBP21.07■□□□□ 0.96
SEC13-217ENST00000482647 FSCN3Q9NQT6 498 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 GGT7Q9UJ14 662 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 PCDHB9Q9Y5E1 797 aa21.07■□□□□ 0.96
SEC13-217ENST00000482647 CEP192Q8TEP8 1941 aa21.06■□□□□ 0.96
SEC13-217ENST00000482647 VILLO15195 856 aa21.06■□□□□ 0.96
SEC13-217ENST00000482647 SDHBP21912 280 aa21.06■□□□□ 0.96
SEC13-217ENST00000482647 CA4P22748 312 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms