RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 SCNN1BP51168 640 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 CDH6P55285 790 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 AP1S1P61966 158 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 YPEL5P62699 121 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 NSUN2Q08J23 767 aaKnown RBP eCLIP20.08■□□□□ 0.81
MSH5-215ENST00000482280 LBRQ14739 615 aaKnown RBP20.08■□□□□ 0.81
MSH5-215ENST00000482280 SMAD1Q15797 465 aaKnown RBP20.08■□□□□ 0.81
MSH5-215ENST00000482280 ZNF542PQ5EBM4 170 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 H2AFVQ71UI9 128 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 POLNQ7Z5Q5 900 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 CAMK1DQ8IU85 385 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 ARHGAP12Q8IWW6 846 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 OR4C6Q8NH72 309 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 BTBD6Q96KE9 485 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 CSPG4P5Q96PW8 444 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 NLGN3Q9NZ94 848 aa20.08■□□□□ 0.81
MSH5-215ENST00000482280 COL5A1P20908 1838 aaPredicted RBP20.08■□□□□ 0.8
MSH5-215ENST00000482280 TP53BP1Q12888 1972 aaPredicted RBP20.08■□□□□ 0.8
MSH5-215ENST00000482280 CHD8Q9HCK8 2581 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 CHD5Q8TDI0 1954 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.07■□□□□ 0.8
MSH5-215ENST00000482280 CSF2P04141 144 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 JUNDP17535 347 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 AMPD1P23109 780 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 HTR1BP28222 390 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 DUSP3P51452 185 aaPredicted RBP20.07■□□□□ 0.8
MSH5-215ENST00000482280 E2F1Q01094 437 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 FZD2Q14332 565 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 LRRC14Q15048 493 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 TMEM52BQ4KMG9 183 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 KANSL1Q7Z3B3 1105 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 MAP7D3Q8IWC1 876 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 SLC25A45Q8N413 288 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 ATL2Q8NHH9 583 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 KLF6Q99612 283 aaPredicted RBP20.07■□□□□ 0.8
MSH5-215ENST00000482280 SLC13A1Q9BZW2 595 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 PCDH12Q9NPG4 1184 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 UCKL1Q9NWZ5 548 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 NCKIPSDQ9NZQ3 722 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 RCOR3Q9P2K3 495 aaPredicted RBP20.07■□□□□ 0.8
MSH5-215ENST00000482280 UVRAGQ9P2Y5 699 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 ATP8A1Q9Y2Q0 1164 aa20.07■□□□□ 0.8
MSH5-215ENST00000482280 TSPAN11A1L157 253 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 FAM149AA5PLN7 773 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 NEBLO76041 1014 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 NME1P15531 152 aaKnown RBP20.06■□□□□ 0.8
MSH5-215ENST00000482280 HNRNPH3P31942 346 aaKnown RBP20.06■□□□□ 0.8
MSH5-215ENST00000482280 PFN3P60673 137 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 SLC18A3Q16572 532 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 ARHGAP36Q6ZRI8 547 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 PDCD7Q8N8D1 485 aaKnown RBP20.06■□□□□ 0.8
MSH5-215ENST00000482280 KCTD6Q8NC69 237 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 CENPTQ96BT3 561 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 PSKH2Q96QS6 385 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 IL12RB2Q99665 862 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 PCDH18Q9HCL0 1135 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 SPASTQ9UBP0 616 aa20.06■□□□□ 0.8
MSH5-215ENST00000482280 KNL1Q8NG31 2342 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 A0A1W2PQ67 120 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 TMEM110-MUSTN1A8MSY1 372 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 TRIM38O00635 465 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 RIOK3O14730 519 aaKnown RBP20.05■□□□□ 0.8
MSH5-215ENST00000482280 SCAMP1O15126 338 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 SPINT1O43278 529 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 KRT7P08729 469 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 C6P13671 934 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 TCF4P15884 667 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 ITIH2P19823 946 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 ACP1P24666 158 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 LIG3P49916 1009 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 BLKP51451 505 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 SLC25A11Q02978 314 aaKnown RBP20.05■□□□□ 0.8
MSH5-215ENST00000482280 PROX2Q3B8N5 592 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 FAXCQ5TGI0 409 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 MARC1Q5VT66 337 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 LRRC49Q8IUZ0 686 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 RNF214Q8ND24 703 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 ZNF548Q8NEK5 533 aaPredicted RBP20.05■□□□□ 0.8
MSH5-215ENST00000482280 LMX1AQ8TE12 382 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 PDCD6IPQ8WUM4 868 aaKnown RBP20.05■□□□□ 0.8
MSH5-215ENST00000482280 TSC1Q92574 1164 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 GLMNQ92990 594 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 CCDC42Q96M95 316 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 ABCG4Q9H172 646 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 USP29Q9HBJ7 922 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 SCUBE2Q9NQ36 999 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 GPR27Q9NS67 375 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 APOBEC3BQ9UH17 382 aaKnown RBP20.05■□□□□ 0.8
MSH5-215ENST00000482280 DOLKQ9UPQ8 538 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 CSNK1G3Q9Y6M4 447 aa20.05■□□□□ 0.8
MSH5-215ENST00000482280 CABIN1Q9Y6J0 2220 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 CEP295Q9C0D2 2601 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 AQP9O43315 295 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 BUB1BO60566 1050 aaPredicted RBP20.04■□□□□ 0.8
MSH5-215ENST00000482280 ELFN1P0C7U0 828 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 KRT10P13645 584 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 IGFALSP35858 605 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 RGRP47804 291 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 SLC10A7Q0GE19 358 aa20.04■□□□□ 0.8
MSH5-215ENST00000482280 ODF2Q5BJF6 829 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms