RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CLDN23Q96B33 292 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 GLOD4Q9HC38 313 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 SCUBE2Q9NQ36 999 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 PRSS16Q9NQE7 514 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 EVLQ9UI08 416 aaPredicted RBP11.72□□□□□ -0.53
HPS4-212ENST00000481910 MMP17Q9ULZ9 603 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 N6AMT1Q9Y5N5 214 aa11.72□□□□□ -0.53
HPS4-212ENST00000481910 CHURC1-FNTBB4DL54 471 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 F5H423 210 aaPredicted RBP11.71□□□□□ -0.53
HPS4-212ENST00000481910 GJB3O75712 270 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 KRT14P02533 472 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 NFKB1P19838 968 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 CES1P23141 567 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 RPS9P46781 194 aaKnown RBP11.71□□□□□ -0.53
HPS4-212ENST00000481910 CSNK1DP48730 415 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 RAD51Q06609 339 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 DHX34Q14147 1143 aaKnown RBP11.71□□□□□ -0.53
HPS4-212ENST00000481910 GAS6Q14393 721 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 MYLK3Q32MK0 819 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 FAAH2Q6GMR7 532 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 KIAA1211LQ6NV74 962 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 MAATS1Q7Z4T9 603 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 PEX5LQ8IYB4 626 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 STK40Q8N2I9 435 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 TAB3Q8N5C8 712 aaPredicted RBP11.71□□□□□ -0.53
HPS4-212ENST00000481910 SLCO2A1Q92959 643 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 DTNBP1Q96EV8 351 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 NUDCD1Q96RS6 583 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 ZDHHC6Q9H6R6 413 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 NOD2Q9HC29 1040 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 PAK5Q9P286 719 aa11.71□□□□□ -0.53
HPS4-212ENST00000481910 PABPN1LA6NDY0 278 aaKnown RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 INSIG1O15503 277 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 TTI1O43156 1089 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 PI15O43692 258 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 CR2P20023 1033 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 GKP32189 559 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 RPL22P35268 128 aaKnown RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 PTGIRP43119 386 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 MAPK8P45983 427 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 VPS41P49754 854 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 MRPS25P82663 173 aaKnown RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 CAMK2GQ13555 558 aaPredicted RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 ELAVL3Q14576 367 aaKnown RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 CRY1Q16526 586 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 PARP6Q2NL67 630 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 CWF19L1Q69YN2 538 aaKnown RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 ALG1LQ6GMV1 187 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 SYT13Q7L8C5 426 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 CHST14Q8NCH0 376 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 ARRDC2Q8TBH0 407 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 OR8D1Q8WZ84 308 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 HEPHQ9BQS7 1158 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 SLC25A51Q9H1U9 297 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 GBA3Q9H227 469 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 CHRDQ9H2X0 955 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 PCDH9Q9HC56 1237 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 POLR3BQ9NW08 1133 aaPredicted RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 UBP1Q9NZI7 540 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 ZMAT5Q9UDW3 170 aaKnown RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 CKAP5Q14008 2032 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 A0A1W2PQF6 199 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 METTL18O95568 372 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 SERPINF2P08697 491 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 PSMB4P28070 264 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 CD86P42081 329 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 SH3BGRP55822 239 aaPredicted RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 AP1S1P61966 158 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 NIPAL4Q0D2K0 466 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 GPS1Q13098 491 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 PRPSAP1Q14558 356 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 RALGPS1Q5JS13 557 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 NCEH1Q6PIU2 408 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 TMEM92Q6UXU6 159 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 C4orf22Q6V702 233 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 SYDE1Q6ZW31 735 aaPredicted RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 JAMLQ86YT9 394 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 SPEM1Q8N4L4 309 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 MMGT1Q8N4V1 131 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 SPATA22Q8NHS9 363 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 GRIN3AQ8TCU5 1115 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 IMP4Q96G21 291 aaKnown RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 FCRL5Q96RD9 977 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 RBM15Q96T37 977 aaKnown RBP eCLIP11.7□□□□□ -0.548e-6■■■■□ 19.3
HPS4-212ENST00000481910 FAM129BQ96TA1 746 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 CPEB1Q9BZB8 566 aaKnown RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 MMADHCQ9H3L0 296 aaPredicted RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 TUBA8Q9NY65 449 aaPredicted RBP11.7□□□□□ -0.54
HPS4-212ENST00000481910 IL36AQ9UHA7 158 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 NEU2Q9Y3R4 380 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 TTC28Q96AY4 2481 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 ANKRD36A6QL64 1941 aa11.7□□□□□ -0.54
HPS4-212ENST00000481910 TRIOO75962 3097 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 POM121CA8CG34 1229 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 RAD51CO43502 376 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 RNASEH1O60930 286 aaKnown RBP11.69□□□□□ -0.54
HPS4-212ENST00000481910 LEFTY1O75610 366 aa11.69□□□□□ -0.54
HPS4-212ENST00000481910 MT-CYBP00156 380 aaPredicted RBP11.69□□□□□ -0.54
HPS4-212ENST00000481910 IL1BP01584 269 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms