RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 CRISP1P54107 249 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 C16orf89Q6UX73 402 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 VITQ6UXI7 678 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 USP53Q70EK8 1073 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 LINC00523Q86TU6 105 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 CNDP2Q96KP4 475 aaKnown RBP9.02□□□□□ -0.97
TTC3-216ENST00000479930 USP28Q96RU2 1077 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 MNTQ99583 582 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 PABPC3Q9H361 631 aaKnown RBP9.02□□□□□ -0.97
TTC3-216ENST00000479930 SETD4Q9NVD3 440 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 NKX1-2Q9UD57 310 aaPredicted RBP9.02□□□□□ -0.97
TTC3-216ENST00000479930 CFL2Q9Y281 166 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 RIPK3Q9Y572 518 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 GRM6O15303 877 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 CIAO1O76071 339 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 ZNF23P17027 643 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 TGM1P22735 817 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 EIF1AXP47813 144 aaKnown RBP9.02□□□□□ -0.97
TTC3-216ENST00000479930 NR1D2Q14995 579 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 NR6A1Q15406 480 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 MAN2A1Q16706 1144 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 OTUD3Q5T2D3 398 aaPredicted RBP9.02□□□□□ -0.97
TTC3-216ENST00000479930 GALNT13Q8IUC8 556 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 LAS2Q8IYD9 372 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 ZNF557Q8N988 423 aaPredicted RBP9.02□□□□□ -0.97
TTC3-216ENST00000479930 TMEM145Q8NBT3 493 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 DUS2Q9NX74 493 aaKnown RBP9.02□□□□□ -0.97
TTC3-216ENST00000479930 HIF3AQ9Y2N7 669 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 A0A0G2JMP0 313 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 ATP6AP2A0A1C7CYW4 349 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 TMEM114B3SHH9 223 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 ATP6AP2O75787 350 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 OR12D1P0DN82 309 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 GPD1P21695 349 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 IL5RAQ01344 420 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 IL18R1Q13478 541 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 OCLNQ16625 522 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 DENND5BQ6ZUT9 1274 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 OR4M2Q8NGB6 313 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 ACAT2Q9BWD1 397 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 EIF3KQ9UBQ5 218 aaKnown RBP9.02□□□□□ -0.97
TTC3-216ENST00000479930 ZNF70Q9UC06 446 aaPredicted RBP9.02□□□□□ -0.97
TTC3-216ENST00000479930 ZNF222Q9UK12 451 aa9.02□□□□□ -0.97
TTC3-216ENST00000479930 RP1P56715 2156 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SLC26A4O43511 780 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 FGFR4P22455 802 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 TSPAN5P62079 268 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SPIRE1Q08AE8 756 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 ZNF211Q13398 564 aaPredicted RBP9.01□□□□□ -0.97
TTC3-216ENST00000479930 STK11Q15831 433 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SNAPC1Q16533 368 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 LANCL3Q6ZV70 420 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 OTUB2Q96DC9 234 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 PRMT6Q96LA8 375 aaPredicted RBP9.01□□□□□ -0.97
TTC3-216ENST00000479930 OSMRQ99650 979 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SAMD4AQ9UPU9 718 aaKnown RBP9.01□□□□□ -0.97
TTC3-216ENST00000479930 POTEMA6NI47 508 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 PODXLO00592 558 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 UBXN7O94888 489 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 TMBIM6P55061 237 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 TAS2R41P59536 307 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 MANEAQ5SRI9 462 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 POTEGQ6S5H5 508 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 RHBDD1Q8TEB9 315 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 MOCOSQ96EN8 888 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 FUT8Q9BYC5 575 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 FN3KQ9H479 309 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SEC61A2Q9H9S3 476 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 FANCD2Q9BXW9 1451 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 ZNF20P17024 532 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 ZNF7P17097 686 aaPredicted RBP9.01□□□□□ -0.97
TTC3-216ENST00000479930 ECHS1P30084 290 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SLFN5Q08AF3 891 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 FAM180BQ6P0A1 224 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 PANX2Q96RD6 677 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 NDC1Q9BTX1 674 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SEMA6CQ9H3T2 930 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 ING4Q9UNL4 249 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SNX24Q9Y343 169 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 ABCA5Q8WWZ7 1642 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SYNJ1O43426 1573 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 PITPNM2Q9BZ72 1349 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 NR5A2O00482 541 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SNCGO76070 127 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 NR3C2P08235 984 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 IGFBP1P08833 259 aaPredicted RBP9.01□□□□□ -0.97
TTC3-216ENST00000479930 FAM153BP0C7A2 387 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 USP17L7P0C7H9 530 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 ARHGAP40Q5TG30 622 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 ILDR2Q71H61 639 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 DENND1CQ8IV53 801 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SPAG16Q8N0X2 631 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 ZNF669Q96BR6 464 aaPredicted RBP9.01□□□□□ -0.97
TTC3-216ENST00000479930 PDE11AQ9HCR9 933 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 RWDD2AQ9UIY3 292 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 UHRF1BP1LA0JNW5 1464 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 hCG_1984214I3L0E3 225 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 SGCEO43556 437 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 PRKAR1AP10644 381 aa9.01□□□□□ -0.97
TTC3-216ENST00000479930 CLCN7P51798 805 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms