RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 AP2A1O95782 977 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CLIC3O95833 236 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 MT-CO1P00395 513 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 SLC5A3P53794 718 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 LRP8Q14114 963 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 XKR4Q5GH76 650 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 IQSEC1Q6DN90 963 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 TWF2Q6IBS0 349 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 ZNF280DQ6N043 979 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CNSTQ6PJW8 725 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 ZNF467Q7Z7K2 595 aaPredicted RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 ZC3HC1Q86WB0 502 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 PSTKQ8IV42 348 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 OR9I1Q8NGQ6 314 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 C12orf43Q96C57 262 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 NXNL1Q96CM4 212 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CELF6Q96J87 481 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 BIRC8Q96P09 236 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 OSBPL6Q9BZF3 934 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 OSBPL2Q9H1P3 480 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 SUCOQ9UBS9 1254 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 TIMM44O43615 452 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 DDHD2O94830 711 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 ATE1O95260 518 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 MYL3P08590 195 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 PAN2Q504Q3 1202 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 DHRS4L2Q6PKH6 230 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 PLEKHH3Q7Z736 793 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 SIX6OS1Q8N1H7 587 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 PELI3Q8N2H9 469 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 ANKRD60Q9BZ19 345 aa13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 CLK4Q9HAZ1 481 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-208ENST00000479530 FAM149AA5PLN7 773 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 SAC3D1A6NKF1 404 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 DLGAP1O14490 977 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 SEC24DO94855 1032 aaPredicted RBP13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 PGK1P00558 417 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 AHSGP02765 367 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 NCAM1P13591 858 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 SCNN1AP37088 669 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 CCR3P51677 355 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 C1QTNF8P60827 252 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 ANO4Q32M45 955 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 REP15Q6BDI9 236 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 LRRC8EQ6NSJ5 796 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 ZBTB49Q6ZSB9 765 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 TLK2Q86UE8 772 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 GPR180Q86V85 440 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 DENND6AQ8IWF6 608 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 GIPC3Q8TF64 312 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 CANT1Q8WVQ1 401 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 PCED1BQ96HM7 432 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 MAELQ96JY0 434 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 TNIP3Q96KP6 325 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 ZNF560Q96MR9 790 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 GPR22Q99680 433 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 CASS4Q9NQ75 786 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 GTSE1Q9NYZ3 720 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 VTI1BQ9UEU0 232 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 DOLKQ9UPQ8 538 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 DOCK3Q8IZD9 2030 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 HSPA1AP0DMV8 641 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 HSPA1BP0DMV9 641 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 WARSP23381 471 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 ADSLP30566 484 aaPredicted RBP13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 CLCNKBP51801 687 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 MPP1Q00013 466 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 PRKCQQ04759 706 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 CTBP1Q13363 440 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 PAFAH1B3Q15102 231 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 SV2CQ496J9 727 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 AGKQ53H12 422 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 ARHGAP36Q6ZRI8 547 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 PATL1Q86TB9 770 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 ZNF786Q8N393 782 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 TXNDC5Q8NBS9 432 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 USP33Q8TEY7 942 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 SENP8Q96LD8 212 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 GPR78Q96P69 363 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 SLC2A13Q96QE2 648 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 GAD1Q99259 594 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 FTHL17Q9BXU8 183 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 MUC3BQ9H195 1237 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 UNC93B1Q9H1C4 597 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 SMOXQ9NWM0 555 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 SH3GLB1Q9Y371 365 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 SQORQ9Y6N5 450 aa13.42□□□□□ -0.26
PDZRN3-208ENST00000479530 TCRBV3S1A0A5B6 114 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 PSMD12O00232 456 aaPredicted RBP13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 CD247P20963 164 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 PSEN2P49810 448 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 YBX1P67809 324 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 KCTD11Q693B1 232 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 OTOP3Q7RTS5 596 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 LRRC43Q8N309 656 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 PNPLA1Q8N8W4 532 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 SPPL2BQ8TCT7 592 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 TFAP2CQ92754 450 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 LRCH3Q96II8 777 aa13.41□□□□□ -0.26
PDZRN3-208ENST00000479530 PLGRKTQ9HBL7 147 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms