RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 WNT3AP56704 352 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 ACAP2Q15057 778 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 AP1ARQ63HQ0 302 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 THEM5Q8N1Q8 247 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 RIN3Q8TB24 985 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 UNC93B1Q9H1C4 597 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 ZNF408Q9H9D4 720 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 KCNU1A8MYU2 1149 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 GPR182O15218 404 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 CRTAMO95727 393 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 PSME3P61289 254 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 TRAP1Q12931 704 aaKnown RBP24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 SEPT6Q14141 434 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 CNSTQ6PJW8 725 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 TMLHEQ9NVH6 421 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 PACSIN3Q9UKS6 424 aa24.81■■□□□ 1.56
SYNGAP1-206ENST00000479510 UTRNP46939 3433 aa24.8■■□□□ 1.56
SYNGAP1-206ENST00000479510 GRIA2P42262 883 aa24.8■■□□□ 1.56
SYNGAP1-206ENST00000479510 TSPY1Q01534 308 aa24.8■■□□□ 1.56
SYNGAP1-206ENST00000479510 NAT14Q8WUY8 206 aa24.8■■□□□ 1.56
SYNGAP1-206ENST00000479510 USP13Q92995 863 aaPredicted RBP24.8■■□□□ 1.56
SYNGAP1-206ENST00000479510 ZFRQ96KR1 1074 aaKnown RBP24.8■■□□□ 1.56
SYNGAP1-206ENST00000479510 UBXN10Q96LJ8 280 aa24.8■■□□□ 1.56
SYNGAP1-206ENST00000479510 UROC1Q96N76 676 aa24.8■■□□□ 1.56
SYNGAP1-206ENST00000479510 PAAF1Q9BRP4 392 aa24.8■■□□□ 1.56
SYNGAP1-206ENST00000479510 IPO11Q9UI26 975 aaKnown RBP24.8■■□□□ 1.56
SYNGAP1-206ENST00000479510 TMEM233B4DJY2 109 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 E9PAM4 449 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 C8BP07358 591 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 SMIM18P0DKX4 95 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 PMLP29590 882 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 RPL5P46777 297 aaKnown RBP24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 SERPINH1P50454 418 aaKnown RBP24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 ATP4BP51164 291 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 RENBPP51606 427 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 CREB5Q02930 508 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 CSHL1Q14406 222 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 HACD2Q6Y1H2 254 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 IMP4Q96G21 291 aaKnown RBP24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 ZNF696Q9H7X3 374 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 PCDHGA7Q9Y5G6 932 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 A8MT66 165 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 SLC7A4O43246 635 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 B3GAT3O94766 335 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 TNFAIP8O95379 198 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 NDST2P52849 883 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 TRIM25Q14258 630 aaKnown RBP24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 OVOS1Q6IE37 1185 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 LILRA2Q8N149 483 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 UMODL1-AS1Q8N2C9 162 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 SPATA6LQ8N4H0 392 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 SCAMP5Q8TAC9 235 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 DUS3LQ96G46 650 aaKnown RBP24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 SERPINB11Q96P15 392 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 NPAS2Q99743 824 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 COPS7BQ9H9Q2 264 aaPredicted RBP24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 AP4B1Q9Y6B7 739 aa24.79■■□□□ 1.56
SYNGAP1-206ENST00000479510 TNFRSF10BO14763 440 aa24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 UBDO15205 165 aa24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 TYMPP19971 482 aa24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 MLLT6P55198 1093 aaPredicted RBP24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 TNK2Q07912 1038 aa24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 IRAK1BP1Q5VVH5 260 aa24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 CUZD1Q86UP6 607 aa24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 LRRTM3Q86VH5 581 aa24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 TMEM102Q8N9M5 508 aaPredicted RBP24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 OR10T2Q8NGX3 314 aa24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 CASP10Q92851 521 aa24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 TMA16Q96EY4 203 aaKnown RBP24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 MARK4Q96L34 752 aa24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 MRPS26Q9BYN8 205 aaKnown RBP24.78■■□□□ 1.56
SYNGAP1-206ENST00000479510 PSMD12O00232 456 aaPredicted RBP24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 SLC2A3P11169 496 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 CHRNA4P43681 627 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 SLC5A3P53794 718 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 USP41Q3LFD5 358 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 RBM20Q5T481 1227 aaKnown RBP24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 CD300LGQ6UXG3 332 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 SGF29Q96ES7 293 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 OLFM1Q99784 485 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 PKP2Q99959 881 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 MTG1Q9BT17 334 aaPredicted RBP24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 PADI4Q9UM07 663 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 HS3ST4Q9Y661 456 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 WISP3O95389 354 aaPredicted RBP24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 PEX11BO96011 259 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 IGHA2P01877 340 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 HNRNPLP14866 589 aaKnown RBP eCLIP24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 LSAMPQ13449 338 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 LRP8Q14114 963 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 FASTKQ14296 549 aaKnown RBP24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 SPATA24Q86W54 205 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 RSPH1Q8WYR4 309 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 DGCR14Q96DF8 476 aaKnown RBP24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 SLC25A23Q9BV35 468 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 TRPC7Q9HCX4 862 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 NDFIP2Q9NV92 336 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 CACNA2D2Q9NY47 1150 aa24.77■■□□□ 1.56
SYNGAP1-206ENST00000479510 SRCAPQ6ZRS2 3230 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms