RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 AASDHQ4L235 1098 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-222ENST00000478095 PEAR1Q5VY43 1037 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-222ENST00000478095 PRR23CQ6ZRP0 262 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 ZNF662Q6ZS27 426 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 C12orf50Q8NA57 414 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-222ENST00000478095 ANKK1Q8NFD2 765 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 PDCD6IPQ8WUM4 868 aaKnown RBP10.37□□□□□ -0.75
HDAC6-222ENST00000478095 DNASE2BQ8WZ79 361 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 SLC6A18Q96N87 628 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 NUDCD1Q96RS6 583 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 TUBGCP5Q96RT8 1024 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 MYOCQ99972 504 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 SEMA3CQ99985 751 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 POLR1EQ9GZS1 481 aaKnown RBP10.37□□□□□ -0.75
HDAC6-222ENST00000478095 PREBQ9HCU5 417 aa10.37□□□□□ -0.75
HDAC6-222ENST00000478095 TRMT1Q9NXH9 659 aaKnown RBP10.37□□□□□ -0.75
HDAC6-222ENST00000478095 FANCMQ8IYD8 2048 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 EML5Q05BV3 1969 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 A0A1W2PPC4 97 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 UPK3BL1B0FP48 263 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 UPK3BL2E5RIL1 263 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 H7C0C1 242 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 TRAFD1O14545 582 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 WNT9AO14904 365 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 KHNYNO15037 678 aaKnown RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 BCAT2O15382 392 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 LRP3O75074 770 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 GNSP15586 552 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 CD27P26842 260 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 PTPN7P35236 360 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 CETN2P41208 172 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 ATP5OP48047 213 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 NR2C2P49116 596 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 CCR5P51681 352 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 IRX4P78413 519 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 IFI35P80217 286 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 OTUD4Q01804 1114 aaKnown RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 NIPAL4Q0D2K0 466 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 GRM3Q14832 879 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 PRKD1Q15139 912 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 DUOXA1Q1HG43 343 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 MEI1Q5TIA1 1274 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 BZW1Q7L1Q6 419 aaKnown RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 TRIM69Q86WT6 500 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 HORMAD1Q86X24 394 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 CNTD1Q8N815 330 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 ACTL9Q8TC94 416 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 TFB1MQ8WVM0 346 aaKnown RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 FATE1Q969F0 183 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 SERAC1Q96JX3 654 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 ZNF641Q96N77 438 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 AGAP3Q96P47 875 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 QKIQ96PU8 341 aaKnown RBP eCLIP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 IL12RB2Q99665 862 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 ORAI3Q9BRQ5 295 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 WRAP53Q9BUR4 548 aaKnown RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 KDM4CQ9H3R0 1056 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 TM9SF3Q9HD45 589 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 FZD3Q9NPG1 666 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 PCDH12Q9NPG4 1184 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 AASDHPPTQ9NRN7 309 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 DKK3Q9UBP4 350 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 SUSD2Q9UGT4 822 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 ZFR2Q9UPR6 939 aaKnown RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 CA5BQ9Y2D0 317 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 OTOGLQ3ZCN5 2332 aa10.36□□□□□ -0.75
HDAC6-222ENST00000478095 NYNRINQ9P2P1 1898 aaKnown RBP10.36□□□□□ -0.75
HDAC6-222ENST00000478095 SDK1Q7Z5N4 2213 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 A0A1B0GTW7 788 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-222ENST00000478095 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-222ENST00000478095 A0A1B0GVT2 93 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 TCRBV7S2A1N4TA0A589 114 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 LNP1A1A4G5 178 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 TSPAN11A1L157 253 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 USP27XA6NNY8 438 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 A8MX80 341 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 C10orf142B7Z368 130 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 F5H423 210 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-222ENST00000478095 KCNK3O14649 394 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 AREL1O15033 823 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 SLC31A1O15431 190 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 LATO43561 262 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 AP1G1O43747 822 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 MMP20O60882 483 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 TJP3O95049 919 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 CPP00450 1065 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 PTPN3P26045 913 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 HOXD12P35452 270 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 DPP6P42658 865 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 CSNK1EP49674 416 aaKnown RBP10.35□□□□□ -0.75
HDAC6-222ENST00000478095 CCDC173Q0VFZ6 552 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 FGL2Q14314 439 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 IHHQ14623 411 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 NOMO1Q15155 1222 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 RPS6KA1Q15418 735 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 UGP2Q16851 508 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 ZNF284Q2VY69 593 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 SEL1L2Q5TEA6 688 aa10.35□□□□□ -0.75
HDAC6-222ENST00000478095 SLC23A3Q6PIS1 610 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms