RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 RPS26P11Q5JNZ5 115 aaPredicted RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 UBXN11Q5T124 520 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 GRTP1Q5TC63 336 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 C6orf163Q5TEZ5 329 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 MROH9Q5TGP6 573 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 OTUD1Q5VV17 481 aaPredicted RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 ITPRIPL1Q6GPH6 555 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 CASC4Q6P4E1 433 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TRMT10BQ6PF06 316 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 PACS1Q6VY07 963 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 CDHR3Q6ZTQ4 885 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 DENND5BQ6ZUT9 1274 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 FAM214BQ7L5A3 538 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 FAM131BQ86XD5 332 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TMPRSS6Q8IU80 811 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 ARID3BQ8IVW6 561 aaPredicted RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 WDR75Q8IWA0 830 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 SIX6OS1Q8N1H7 587 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TMEM86AQ8N2M4 240 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 NME8Q8N427 588 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TEX9Q8N6V9 391 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 PPP1R14CQ8TAE6 165 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 NPLOC4Q8TAT6 608 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 DNAJB3Q8WWF6 145 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 BRI3BPQ8WY22 251 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 NT5C3BQ969T7 300 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 MCUR1Q96AQ8 359 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 FAM149B1Q96BN6 582 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 P2RY11Q96G91 374 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 C20orf173Q96LM9 149 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 NUDCD1Q96RS6 583 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 MIPEPQ99797 713 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 CPNE1Q99829 537 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 MED10Q9BTT4 135 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 KATNAL1Q9BW62 490 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 SLC13A1Q9BZW2 595 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 IRF2BPLQ9H1B7 796 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 CXCL16Q9H2A7 254 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TTYH1Q9H313 450 aaPredicted RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 ZCCHC4Q9H5U6 513 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 DENND2DQ9H6A0 471 aaPredicted RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 LRRC40Q9H9A6 602 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 UGT1A7Q9HAW7 530 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 UGT1A10Q9HAW8 530 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 UGT1A8Q9HAW9 530 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 XPNPEP3Q9NQH7 507 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 FBXO6Q9NRD1 293 aaPredicted RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 SLC38A7Q9NVC3 462 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 THAP1Q9NVV9 213 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TXNDC16Q9P2K2 825 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 PPARGC1AQ9UBK2 798 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 TAGLN3Q9UI15 199 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 MID2Q9UJV3 735 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 GJD2Q9UKL4 321 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 HBS1LQ9Y450 684 aaKnown RBP5.03□□□□□ -1.6
SF3B6-202ENST00000478050 HES2Q9Y543 173 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 LRRC42Q9Y546 428 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 IPPQ9Y573 584 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 SCN10AQ9Y5Y9 1956 aa5.03□□□□□ -1.6
SF3B6-202ENST00000478050 DOCK4Q8N1I0 1966 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 TCF20Q9UGU0 1960 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CCDC195A0A1B0GUA6 201 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 FAM237BA0A1B0GVD1 139 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 MAGEB16A2A368 324 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 C17orf102A2RUQ5 167 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CAPN14A8MX76 684 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 F8W8V4 182 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 M0QYT0 321 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 AP3B1O00203 1094 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 ETV2O00321 342 aaPredicted RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CYB561D2O14569 222 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 GABRDO14764 452 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 TPP1O14773 563 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CAPN9O14815 690 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 DCLK1O15075 740 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SMAD7O15105 426 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 ADCY6O43306 1168 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 HCRTO43612 131 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CREB3O43889 395 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 GREM1O60565 184 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PLIN3O60664 434 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 H2AFYO75367 372 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 CIB2O75838 187 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 KLHL2O95198 593 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 PSMG1O95456 288 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 AP2A1O95782 977 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 F9P00740 461 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SERPINE1P05121 402 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 MPOP05164 745 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 POLBP06746 335 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 SERPINA6P08185 405 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 ITGA2BP08514 1039 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 MYL3P08590 195 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 RPSAP08865 295 aaKnown RBP5.02□□□□□ -1.61
SF3B6-202ENST00000478050 FAM200BP0CF97 657 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 MED14OSP0DP75 135 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 RARBP10826 455 aa5.02□□□□□ -1.61
SF3B6-202ENST00000478050 MYL4P12829 197 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms