RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 GRTP1Q5TC63 336 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 KLC3Q6P597 504 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 C4orf22Q6V702 233 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 CLEC4FQ8N1N0 589 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 C2orf69Q8N8R5 385 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 ZC3H15Q8WU90 426 aaKnown RBP9.84□□□□□ -0.83
CMC1-209ENST00000477739 LRRC39Q96DD0 335 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 MTFMTQ96DP5 389 aaKnown RBP9.84□□□□□ -0.83
CMC1-209ENST00000477739 FBXL20Q96IG2 436 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 NSUN5Q96P11 429 aaKnown RBP9.84□□□□□ -0.83
CMC1-209ENST00000477739 SGIP1Q9BQI5 828 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 ALG2Q9H553 416 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 TLE6Q9H808 572 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 IPPQ9Y573 584 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 SCN1AP35498 2009 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 SF3B1O75533 1304 aaKnown RBP eCLIP9.84□□□□□ -0.831e-6■■■■■ 53.5
CMC1-209ENST00000477739 IQCA1LA6NCM1 817 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 DPYSL4O14531 572 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 NOL3O60936 208 aaKnown RBP9.84□□□□□ -0.83
CMC1-209ENST00000477739 SRP72O76094 671 aaKnown RBP9.84□□□□□ -0.83
CMC1-209ENST00000477739 KCNH1O95259 989 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 CELF2O95319 508 aaKnown RBP9.84□□□□□ -0.83
CMC1-209ENST00000477739 IRF1P10914 325 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 PBX3P40426 434 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 PSEN2P49810 448 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 LIMK2P53671 638 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 LILRA4P59901 499 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 LAPTM4AQ15012 233 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 PERM1Q5SV97 790 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 NEPROQ6NW34 567 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 TXNDC5Q8NBS9 432 aaKnown RBP9.84□□□□□ -0.83
CMC1-209ENST00000477739 CCDC138Q96M89 665 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 RNF145Q96MT1 663 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 TMEM74Q96NL1 305 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 TRAPPC9Q96Q05 1148 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 ACOX2Q99424 681 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 APOL5Q9BWW9 433 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 DMAP1Q9NPF5 467 aaPredicted RBP9.84□□□□□ -0.83
CMC1-209ENST00000477739 FBXO5Q9UKT4 447 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 PSMD13Q9UNM6 376 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 USP22Q9UPT9 525 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 ARID2Q68CP9 1835 aa9.84□□□□□ -0.83
CMC1-209ENST00000477739 C1orf232A0A0U1RR37 186 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 C17orf102A2RUQ5 167 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 F8W8V4 182 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 BOLA2-SMG1P6H3BVE0 249 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 LIN7AO14910 233 aaPredicted RBP9.83□□□□□ -0.84
CMC1-209ENST00000477739 GPR39O43194 453 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 TIMM44O43615 452 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 SNNO75324 88 aaPredicted RBP9.83□□□□□ -0.84
CMC1-209ENST00000477739 AOC1P19801 751 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 EFNA1P20827 205 aaPredicted RBP9.83□□□□□ -0.84
CMC1-209ENST00000477739 CREB5Q02930 508 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 CDH17Q12864 832 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 SLC25A52Q3SY17 297 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 SH2D5Q6ZV89 423 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 TAS2R42Q7RTR8 314 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 SNX29P2Q8IUI4 249 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 OR6K2Q8NGY2 324 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 CLHC1Q8NHS4 586 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 MOCS1Q9NZB8 636 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 ZMYM5Q9UJ78 669 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 DERAQ9Y315 318 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 PCDHB12Q9Y5F1 795 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 LINC00854A0A1B0GVQ3 168 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 BIRC5O15392 142 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 PGK1P00558 417 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 NOS2P35228 1153 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 DSC2Q02487 901 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 DGCR6Q14129 220 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 IMPG1Q17R60 797 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 TIGD2Q4W5G0 525 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 TMEM214Q6NUQ4 689 aaKnown RBP9.83□□□□□ -0.84
CMC1-209ENST00000477739 CXCL17Q6UXB2 119 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 ZNF598Q86UK7 904 aaKnown RBP9.83□□□□□ -0.84
CMC1-209ENST00000477739 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.83□□□□□ -0.84
CMC1-209ENST00000477739 ARRDC4Q8NCT1 418 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 SIKE1Q9BRV8 207 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 MTG1Q9BT17 334 aaPredicted RBP9.83□□□□□ -0.84
CMC1-209ENST00000477739 MLPHQ9BV36 600 aaPredicted RBP9.83□□□□□ -0.84
CMC1-209ENST00000477739 ADAMTS10Q9H324 1103 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 ZNF180Q9UJW8 692 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 VPS4AQ9UN37 437 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 HEATR9A2RTY3 570 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 E2F6O75461 281 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 FMO4P31512 558 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 INHBEP58166 350 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 TRAF2Q12933 501 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 PRKAA1Q13131 559 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 TAF1CQ15572 869 aaPredicted RBP9.83□□□□□ -0.84
CMC1-209ENST00000477739 RABL3Q5HYI8 236 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 GNASQ5JWF2 1037 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 LIPMQ5VYY2 423 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 NAPEPLDQ6IQ20 393 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 AFAP1L2Q8N4X5 818 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 BPIFB6Q8NFQ5 453 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 ACTRT2Q8TDY3 377 aa9.83□□□□□ -0.84
CMC1-209ENST00000477739 RMND5BQ96G75 393 aaPredicted RBP9.83□□□□□ -0.84
CMC1-209ENST00000477739 NR1H4Q96RI1 486 aaPredicted RBP9.83□□□□□ -0.84
CMC1-209ENST00000477739 COLEC11Q9BWP8 271 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms