RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ITIH2P19823 946 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 SERPINB6P35237 376 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 ADKP55263 362 aaKnown RBP21.96■■□□□ 1.11
COL9A3-211ENST00000477612 CDH6P55285 790 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 SLC10A7Q0GE19 358 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 LBRQ14739 615 aaKnown RBP21.96■■□□□ 1.11
COL9A3-211ENST00000477612 AGERQ15109 404 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 TMPRSS7Q7RTY8 843 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 CAMK1DQ8IU85 385 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 LRRC49Q8IUZ0 686 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 SLC25A45Q8N413 288 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 EID2Q8N6I1 236 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 KDF1Q8NAX2 398 aaPredicted RBP21.96■■□□□ 1.11
COL9A3-211ENST00000477612 SPOCK2Q92563 424 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 CALN1Q9BXU9 219 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 ATP13A3Q9H7F0 1226 aa21.96■■□□□ 1.11
COL9A3-211ENST00000477612 KNTC1P50748 2209 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 TOR1BO14657 336 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 ENC1O14682 589 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 RIOK3O14730 519 aaKnown RBP21.95■■□□□ 1.1
COL9A3-211ENST00000477612 MMP20O60882 483 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 C1SP09871 688 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 CR2P20023 1033 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 SERPINA4P29622 427 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 MAN1A1P33908 653 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 ATP13A4Q4VNC1 1196 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 ZSWIM9Q86XI8 627 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 CNGA4Q8IV77 575 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 CXorf40AQ8TE69 158 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 CNDP2Q96KP4 475 aaKnown RBP21.95■■□□□ 1.1
COL9A3-211ENST00000477612 NSMCE3Q96MG7 304 aa21.95■■□□□ 1.1
COL9A3-211ENST00000477612 NHEJ1Q9H9Q4 299 aaPredicted RBP21.95■■□□□ 1.1
COL9A3-211ENST00000477612 GOLGA4Q13439 2230 aaKnown RBP21.94■■□□□ 1.1
COL9A3-211ENST00000477612 CFAP69A5D8W1 941 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 TMEM8BA6NDV4 472 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 TRAFD1O14545 582 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-211ENST00000477612 PIAS2O75928 621 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 CD48P09326 243 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 CDK4P11802 303 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 DGKAP23743 735 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 HSPA9P38646 679 aaKnown RBP21.94■■□□□ 1.1
COL9A3-211ENST00000477612 AP1S1P61966 158 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 YPEL5P62699 121 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 DPYSL3Q14195 570 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 FZD2Q14332 565 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 KRT81Q14533 505 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 PAFAH1B3Q15102 231 aaKnown RBP21.94■■□□□ 1.1
COL9A3-211ENST00000477612 PDK2Q15119 407 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 ST3GAL2Q16842 350 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 LRRC73Q5JTD7 316 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 CCNI2Q6ZMN8 369 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-211ENST00000477612 PTAR1Q7Z6K3 402 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-211ENST00000477612 CPNE8Q86YQ8 564 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 TP53I13Q8NBR0 393 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-211ENST00000477612 CCDC42Q96M95 316 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 ZNF670Q9BS34 389 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 C1QTNF7Q9BXJ2 289 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 PCDH12Q9NPG4 1184 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 USP24Q9UPU5 2620 aa21.94■■□□□ 1.1
COL9A3-211ENST00000477612 MTA2O94776 668 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 KRT7P08729 469 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 GIMD1P0DJR0 217 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 XPAP23025 273 aaPredicted RBP21.93■■□□□ 1.1
COL9A3-211ENST00000477612 SCNN1BP51168 640 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 TAS2R40P59535 323 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 BCL2L1Q07817 233 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 MMRN1Q13201 1228 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 TCEAL1Q15170 157 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 SLC35G2Q8TBE7 412 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 FAF2Q96CS3 445 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 ATP8A1Q9Y2Q0 1164 aa21.93■■□□□ 1.1
COL9A3-211ENST00000477612 CACNA1BQ00975 2339 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 MYLKQ15746 1914 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.92■■□□□ 1.1
COL9A3-211ENST00000477612 AKR1B15C9JRZ8 316 aaPredicted RBP21.92■■□□□ 1.1
COL9A3-211ENST00000477612 SDC3O75056 442 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 CSF2P04141 144 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 CAPNS1P04632 268 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 IGFALSP35858 605 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 MMP12P39900 470 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 ARHGAP25P42331 645 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 SSR1P43307 286 aaKnown RBP21.92■■□□□ 1.1
COL9A3-211ENST00000477612 ACADVLP49748 655 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 HNRNPKP61978 463 aaKnown RBP eCLIP21.92■■□□□ 1.1
COL9A3-211ENST00000477612 POLR2LP62875 67 aaKnown RBP21.92■■□□□ 1.1
COL9A3-211ENST00000477612 ZNF211Q13398 564 aaPredicted RBP21.92■■□□□ 1.1
COL9A3-211ENST00000477612 SMAD1Q15797 465 aaKnown RBP21.92■■□□□ 1.1
COL9A3-211ENST00000477612 PROX2Q3B8N5 592 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 RALGPS1Q5JS13 557 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 NCBP2-AS2Q69YL0 99 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 ERAP2Q6P179 960 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 PARGQ86W56 976 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 MAP7D3Q8IWC1 876 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 GALNT15Q8N3T1 639 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 PGBD5Q8N414 524 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 ATPAF2Q8N5M1 289 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 TEX26Q8N6G2 289 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 OR4C6Q8NH72 309 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 PCDH19Q8TAB3 1148 aa21.92■■□□□ 1.1
COL9A3-211ENST00000477612 NUDCD1Q96RS6 583 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms