RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PHLDB2Q86SQ0 1253 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 ZDHHC17Q8IUH5 632 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 CCNJLQ8IV13 435 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 ZNF683Q8IZ20 524 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 TMEM35BQ8NCS4 154 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 MSANTD4Q8NCY6 345 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 OR2AP1Q8NGE2 309 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 SHC3Q92529 594 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 USP7Q93009 1102 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 C18orf8Q96DM3 657 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 EXOC2Q96KP1 924 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 C1orf74Q96LT6 269 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 GDAP1L1Q96MZ0 367 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 PHF12Q96QT6 1004 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 OSBPL1AQ9BXW6 950 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 EDEM3Q9BZQ6 932 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 METTL5Q9NRN9 209 aaKnown RBP6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 FOXJ2Q9P0K8 574 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 AKAP7Q9P0M2 348 aaPredicted RBP6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 DNAJC12Q9UKB3 198 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 OR1A2Q9Y585 309 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 PCDHGA7Q9Y5G6 932 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 SPTA1P02549 2419 aa6.76□□□□□ -1.33
RTFDC1-206ENST00000477485 UBR5O95071 2799 aaPredicted RBP6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 IGLV3-10A0A075B6K4 115 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 A0A1W2PQM1 296 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 FOXN3O00409 490 aaPredicted RBP6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 NOBOXO60393 691 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 RAMP2O60895 175 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 TMCC1O94876 653 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 PIGNO95427 931 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 POP4O95707 220 aaKnown RBP6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 GSRP00390 522 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 TNFP01375 233 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 FLT3P36888 993 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 ETV5P41161 510 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 SRP54P61011 504 aaKnown RBP6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 INPP5AQ14642 412 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 NFATC4Q14934 902 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 TBR1Q16650 682 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 MYLK3Q32MK0 819 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 ACBD5Q5T8D3 534 aaPredicted RBP6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 TMEM164Q5U3C3 297 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 ERAP2Q6P179 960 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 NYAP1Q6ZVC0 841 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 EMC1Q8N766 993 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 TP53I13Q8NBR0 393 aaPredicted RBP6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 FAM46DQ8NEK8 389 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 ZNF397Q8NF99 534 aaPredicted RBP6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 ATL2Q8NHH9 583 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 SPATA20Q8TB22 786 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 ASB12Q8WXK4 309 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 ARHGEF2Q92974 986 aaKnown RBP6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 ISG20Q96AZ6 181 aaKnown RBP6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 CENPTQ96BT3 561 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 PDXPQ96GD0 296 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 TBATAQ96M53 351 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 TIGD1Q96MW7 591 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 WDR92Q96MX6 357 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 HAPLN3Q96S86 360 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 CMKLR1Q99788 373 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 DPEP2Q9H4A9 486 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 STARD5Q9NSY2 213 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 NDFIP2Q9NV92 336 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 OR12D3Q9UGF7 316 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 AJAP1Q9UKB5 411 aaPredicted RBP6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 RNF215Q9Y6U7 377 aa6.75□□□□□ -1.33
RTFDC1-206ENST00000477485 AHCTF1Q8WYP5 2266 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 TMEM110-MUSTN1A8MSY1 372 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 CACNB4O00305 520 aaPredicted RBP6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 TOR1BO14657 336 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 NVLO15381 856 aaKnown RBP6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 SUV39H1O43463 412 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 CD160O95971 181 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 PRKCGP05129 697 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 PRKCSHP14314 528 aaPredicted RBP6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 ITGB6P18564 788 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 BMP6P22004 513 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 PON1P27169 355 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 ALDH4A1P30038 563 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 SDC4P31431 198 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 CCKBRP32239 447 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 CLCN1P35523 988 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 MAPKAPK2P49137 400 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 ATP1A2P50993 1020 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 MARSP56192 900 aaKnown RBP6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 BPIFB4P59827 614 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 ELP6Q0PNE2 266 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 MORC3Q14149 939 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 CLCA4Q14CN2 919 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 SKIDA1Q1XH10 827 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 C15orf59Q2T9L4 293 aaPredicted RBP6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 RAB6CQ53S08 254 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 NAA35Q5VZE5 725 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 LVRNQ6Q4G3 990 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 XKR5Q6UX68 686 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 XYLT1Q86Y38 959 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 SFTPA2Q8IWL1 248 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 IL22RA1Q8N6P7 574 aa6.74□□□□□ -1.33
RTFDC1-206ENST00000477485 RCBTB1Q8NDN9 531 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms