RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 A0A1W2PQM1 296 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 OR6C75A6NL08 312 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 B4E171 279 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 NPIPB11E5RHQ5 1161 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 IRF1P10914 325 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 NAGAP17050 411 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 TNFAIP3P21580 790 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 HOXA11P31270 313 aaPredicted RBP3.46□□□□□ -1.86
TARDBP-208ENST00000477447 ARRB2P32121 409 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 TSPAN7P41732 249 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 KCNJ4P48050 445 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 EIF3BP55884 814 aaKnown RBP3.46□□□□□ -1.86
TARDBP-208ENST00000477447 GRIK3Q13003 919 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 DDX10Q13206 875 aaKnown RBP3.46□□□□□ -1.86
TARDBP-208ENST00000477447 ITGADQ13349 1161 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 HIST2H2ACQ16777 129 aaPredicted RBP3.46□□□□□ -1.86
TARDBP-208ENST00000477447 SOWAHAQ2M3V2 549 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 DCAF6Q58WW2 860 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 TXNDC8Q6A555 127 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 FAAH2Q6GMR7 532 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 INO80CQ6PI98 192 aaPredicted RBP3.46□□□□□ -1.86
TARDBP-208ENST00000477447 C9orf47Q6ZRZ4 202 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 RSRC2Q7L4I2 434 aaKnown RBP3.46□□□□□ -1.86
TARDBP-208ENST00000477447 NOXA1Q86UR1 476 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 PRR26Q8N8Z3 221 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 ARRDC2Q8TBH0 407 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 KCNG4Q8TDN1 519 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 UCMAQ8WVF2 138 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 RFFLQ8WZ73 363 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 PIP5K1AQ99755 562 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 PDCL3Q9H2J4 239 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 BPIFA1Q9NP55 256 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 HIF1ANQ9NWT6 349 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 A4GNTQ9UNA3 340 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 SCINQ9Y6U3 715 aa3.46□□□□□ -1.86
TARDBP-208ENST00000477447 KDM3AQ9Y4C1 1321 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 TTC3P53804 2025 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 NPIPB15A6NHN6 443 aaPredicted RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 TTC36A6NLP5 189 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 TIMM23O14925 209 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 ASAP2O43150 1006 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 KLK8O60259 260 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 SEC31AO94979 1220 aaKnown RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 MT-CYBP00156 380 aaPredicted RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 TFP02787 698 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 UBL4AP11441 157 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 HOXD3P31249 432 aaPredicted RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 DDIT3P35638 169 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 GNAQP50148 359 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 HTR6P50406 440 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 NUDT6P53370 316 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 RARSP54136 660 aaKnown RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 ABATP80404 500 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 TBCEQ15813 527 aaPredicted RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 TCTN1Q2MV58 587 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 FAM180BQ6P0A1 224 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 CPLX2Q6PUV4 134 aaKnown RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 LCTLQ6UWM7 567 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 DSTYKQ6XUX3 929 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 DIS3L2Q8IYB7 885 aaKnown RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 FBXL14Q8N1E6 418 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 TDRD7Q8NHU6 1098 aaKnown RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 ERGIC1Q969X5 290 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 FBXL8Q96CD0 374 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 PABPC5Q96DU9 382 aaKnown RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 TXNDC15Q96J42 360 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 CAMK1GQ96NX5 476 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 H2AFJQ9BTM1 129 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 GLIS2Q9BZE0 524 aaPredicted RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 ZHX3Q9H4I2 956 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 EBF3Q9H4W6 596 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 SMYD2Q9NRG4 433 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 PLK2Q9NYY3 685 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 CISD1Q9NZ45 108 aaKnown RBP3.45□□□□□ -1.86
TARDBP-208ENST00000477447 IL36RNQ9UBH0 155 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 AASSQ9UDR5 926 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 MKLN1Q9UL63 735 aa3.45□□□□□ -1.86
TARDBP-208ENST00000477447 IGHV4-28A0A0C4DH34 117 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 LRRC53A6NM62 1247 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 MTA2O94776 668 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 NTN1O95631 604 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 SPARCP09486 303 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 ETFAP13804 333 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 ITGAXP20702 1163 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 C21orf33P30042 268 aaPredicted RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 MAN1A1P33908 653 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 CPOXP36551 454 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 PIGAP37287 484 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 RPL3P39023 403 aaKnown RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 RGS2P41220 211 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 GABRB2P47870 512 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 AMTP48728 403 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 PCYT1AP49585 367 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 ST3GAL1Q11201 340 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 FOXD4Q12950 439 aaPredicted RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 DCTN2Q13561 401 aaKnown RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 GSTA3Q16772 222 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 TYW3Q6IPR3 259 aaKnown RBP3.44□□□□□ -1.86
TARDBP-208ENST00000477447 CDC73Q6P1J9 531 aa3.44□□□□□ -1.86
TARDBP-208ENST00000477447 CPLX4Q7Z7G2 160 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms