RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-212	ENST00000477182	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.75	□□□□□ -0.53
LSM2-212	ENST00000477182	CLEC4E	Q9ULY5	219 aa		11.75	□□□□□ -0.53
LSM2-212	ENST00000477182	HEY1	Q9Y5J3	304 aa		11.75	□□□□□ -0.53
LSM2-212	ENST00000477182	TP53BP1	Q12888	1972 aa	Predicted RBP	11.75	□□□□□ -0.53
LSM2-212	ENST00000477182	PDE2A	O00408	941 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	MAP3K6	O95382	1288 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	RHOC	P08134	193 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	CISD3	P0C7P0	127 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	PECAM1	P16284	738 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	TGM2	P21980	687 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	CD27	P26842	260 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	SERPINB6	P35237	376 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	MAPKAPK2	P49137	400 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	NUMB	P49757	651 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	GBE1	Q04446	702 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	SLC10A2	Q12908	348 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	KLF1	Q13351	362 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	CDH18	Q13634	790 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	ENPP2	Q13822	863 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	SIX1	Q15475	284 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	FSCB	Q5H9T9	825 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	CXorf57	Q6NSI4	855 aa	Known RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	FAM124A	Q86V42	546 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	ARHGAP12	Q8IWW6	846 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	DCBLD1	Q8N8Z6	715 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	OR52K2	Q8NGK3	314 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	KCNE4	Q8WWG9	221 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	HIC2	Q96JB3	615 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	ELF4	Q99607	663 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	FAM118B	Q9BPY3	351 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	ACE2	Q9BYF1	805 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	RETREG1	Q9H6L5	497 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	NOL6	Q9H6R4	1146 aa	Known RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	DONSON	Q9NYP3	566 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	ANKMY1	Q9P2S6	941 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	CDC23	Q9UJX2	597 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	SLCO1B1	Q9Y6L6	691 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	CKAP5	Q14008	2032 aa		11.74	□□□□□ -0.53
LSM2-212	ENST00000477182	MYO9A	B2RTY4	2548 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	APOC4-APOC2	K7ER74	178 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	CBX4	O00257	560 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	DFFA	O00273	331 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	VILL	O15195	856 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	KLK10	O43240	276 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	RAMP2	O60895	175 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	APOC2	P02655	101 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	GP1BB	P13224	206 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	PAFAH1B1	P43034	410 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	NDST2	P52849	883 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	COPA	P53621	1224 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	ERVPABLB-1	P60509	514 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	OTUD4	Q01804	1114 aa	Known RBP	11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	RNF219	Q5W0B1	726 aa	Predicted RBP	11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	AFMID	Q63HM1	303 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	SETD3	Q86TU7	594 aa	Predicted RBP	11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	GATAD2A	Q86YP4	633 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	UMODL1-AS1	Q8N2C9	162 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	LZTR1	Q8N653	840 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	OR7D4	Q8NG98	312 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	FIBIN	Q8TAL6	211 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	ACTL9	Q8TC94	416 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	MAIP1	Q8WWC4	291 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	C1orf54	Q8WWF1	131 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	AHCTF1	Q8WYP5	2266 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	P3H4	Q92791	437 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	HMCES	Q96FZ2	354 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	NAP1L3	Q99457	506 aa	Predicted RBP	11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	AP1M1	Q9BXS5	423 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	TRIM4	Q9C037	500 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	SLC39A8	Q9C0K1	460 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	DTL	Q9NZJ0	730 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	RNF14	Q9UBS8	474 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	TBC1D30	Q9Y2I9	924 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	SLC27A6	Q9Y2P4	619 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	MRFAP1	Q9Y605	127 aa		11.73	□□□□□ -0.53
LSM2-212	ENST00000477182	NUMA1	Q14980	2115 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182		A0A0D9SEW6	157 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	ILVBL	A1L0T0	632 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	RASA4B	C9J798	803 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	KRIT1	O00522	736 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	TERT	O14746	1132 aa	Known RBP	11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	RASA4	O43374	803 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	DXO	O77932	396 aa	Known RBP	11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	SEMA4F	O95754	770 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	CKMT2	P17540	419 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	MZF1	P28698	734 aa	Predicted RBP	11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	CD70	P32970	193 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	ACVRL1	P37023	503 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	CSK	P41240	450 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	NR2C2	P49116	596 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	PAPOLA	P51003	745 aa	Known RBP	11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	YBEY	P58557	167 aa	Predicted RBP	11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	RACK1	P63244	317 aa	Known RBP	11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	E2F1	Q01094	437 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	GNA12	Q03113	381 aa		11.72	□□□□□ -0.53
LSM2-212	ENST00000477182	GALNT2	Q10471	571 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms