RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 MGME1Q9BQP7 344 aa13.56□□□□□ -0.24
ACTN4-205ENST00000477174 IL21RQ9HBE5 538 aa13.56□□□□□ -0.24
ACTN4-205ENST00000477174 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
ACTN4-205ENST00000477174 DTLQ9NZJ0 730 aa13.56□□□□□ -0.24
ACTN4-205ENST00000477174 AMACRQ9UHK6 382 aa13.56□□□□□ -0.24
ACTN4-205ENST00000477174 SALL4Q9UJQ4 1053 aa13.56□□□□□ -0.24
ACTN4-205ENST00000477174 FNDC3AQ9Y2H6 1198 aaKnown RBP13.56□□□□□ -0.24
ACTN4-205ENST00000477174 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.56□□□□□ -0.24
ACTN4-205ENST00000477174 HYOU1Q9Y4L1 999 aa13.56□□□□□ -0.24
ACTN4-205ENST00000477174 DUSP10Q9Y6W6 482 aa13.56□□□□□ -0.24
ACTN4-205ENST00000477174 ASCC3Q8N3C0 2202 aaKnown RBP13.56□□□□□ -0.24
ACTN4-205ENST00000477174 CABIN1Q9Y6J0 2220 aa13.56□□□□□ -0.24
ACTN4-205ENST00000477174 PCDH15Q96QU1 1955 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 H0Y8X5 98 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 TRAFD1O14545 582 aaPredicted RBP13.55□□□□□ -0.24
ACTN4-205ENST00000477174 KCNK3O14649 394 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 APOL1O14791 398 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 SPINT1O43278 529 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 PCDHGA12O60330 932 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 SOCS5O75159 536 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 ZRANB2O95218 330 aaKnown RBP eCLIP13.55□□□□□ -0.24
ACTN4-205ENST00000477174 KRT1P04264 644 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 TNNT1P13805 278 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 CCNB1P14635 433 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 RXRGP48443 463 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 NR2C2P49116 596 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 NOVA1P51513 510 aaKnown RBP13.55□□□□□ -0.24
ACTN4-205ENST00000477174 NAP1L1P55209 391 aaKnown RBP13.55□□□□□ -0.24
ACTN4-205ENST00000477174 FGL2Q14314 439 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 PDK1Q15118 436 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 TAZQ16635 292 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 TMEM52BQ4KMG9 183 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 DCP2Q8IU60 420 aaKnown RBP13.55□□□□□ -0.24
ACTN4-205ENST00000477174 KATNAL2Q8IYT4 538 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 PGBD5Q8N414 524 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 OXR1Q8N573 874 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 KIAA1524Q8TCG1 905 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 HDAC11Q96DB2 347 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 ELF4Q99607 663 aaPredicted RBP13.55□□□□□ -0.24
ACTN4-205ENST00000477174 LACRTQ9GZZ8 138 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 BRD8Q9H0E9 1235 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 NOD2Q9HC29 1040 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 PCDH12Q9NPG4 1184 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 SCUBE2Q9NQ36 999 aa13.55□□□□□ -0.24
ACTN4-205ENST00000477174 A0A1B0GTQ1 180 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 CFAP69A5D8W1 941 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
ACTN4-205ENST00000477174 YKT6O15498 198 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 HTRA2O43464 458 aaPredicted RBP13.54□□□□□ -0.24
ACTN4-205ENST00000477174 TM7SF2O76062 418 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 CDKN2BP42772 138 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 ARRB1P49407 418 aaPredicted RBP13.54□□□□□ -0.24
ACTN4-205ENST00000477174 PPIDQ08752 370 aaKnown RBP13.54□□□□□ -0.24
ACTN4-205ENST00000477174 KIF5AQ12840 1032 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 TFDP2Q14188 446 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 TFDP3Q5H9I0 405 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 PSAPL1Q6NUJ1 521 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 MFSD7Q6UXD7 560 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 BZW1Q7L1Q6 419 aaKnown RBP13.54□□□□□ -0.24
ACTN4-205ENST00000477174 ABI3BPQ7Z7G0 1075 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 KIAA1328Q86T90 577 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 SPATS2Q86XZ4 545 aaKnown RBP13.54□□□□□ -0.24
ACTN4-205ENST00000477174 RFX6Q8HWS3 928 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 CCNYQ8ND76 341 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 EXD1Q8NHP7 514 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 CXorf40AQ8TE69 158 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 CENPTQ96BT3 561 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 KLF6Q99612 283 aaPredicted RBP13.54□□□□□ -0.24
ACTN4-205ENST00000477174 C1QTNF7Q9BXJ2 289 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 POLR1EQ9GZS1 481 aaKnown RBP13.54□□□□□ -0.24
ACTN4-205ENST00000477174 GOLPH3Q9H4A6 298 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 RBM22Q9NW64 420 aaKnown RBP eCLIP13.54□□□□□ -0.24
ACTN4-205ENST00000477174 GGT7Q9UJ14 662 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 ITM2BQ9Y287 266 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 ATP8A1Q9Y2Q0 1164 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 HEY1Q9Y5J3 304 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 PCNX2A6NKB5 2137 aa13.54□□□□□ -0.24
ACTN4-205ENST00000477174 TOR1BO14657 336 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 FPGTO14772 594 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 SH3BP5O60239 455 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 MMP20O60882 483 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 MAP3K6O95382 1288 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 THEGLP0DJG4 465 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 ITIH2P19823 946 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 NFKBIAP25963 317 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 CCT8P50990 548 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 LRRC73Q5JTD7 316 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 ALG1LQ6GMV1 187 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 SPOCD1Q6ZMY3 1216 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 Q6ZSR6 202 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 ZSWIM9Q86XI8 627 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 NAXDQ8IW45 347 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 CCDC13Q8IYE1 715 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 PAF1Q8N7H5 531 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 DENND6BQ8NEG7 585 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 DEFB124Q8NES8 71 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 RBM41Q96IZ5 413 aaKnown RBP13.53□□□□□ -0.24
ACTN4-205ENST00000477174 BMFQ96LC9 184 aa13.53□□□□□ -0.24
ACTN4-205ENST00000477174 NSMCE3Q96MG7 304 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms