RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 GOLGA6L9A6NEM1 432 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 UPK3BL1B0FP48 263 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 PATE3B3GLJ2 98 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 UPK3BL2E5RIL1 263 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 NEMP1O14524 444 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 BCAT2O15382 392 aaPredicted RBP17.95■□□□□ 0.46
SMIM4-202ENST00000476842 SPINT1O43278 529 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 XPAP23025 273 aaPredicted RBP17.95■□□□□ 0.46
SMIM4-202ENST00000476842 RPS21P63220 83 aaKnown RBP17.95■□□□□ 0.46
SMIM4-202ENST00000476842 IRX4P78413 519 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 OTUD4Q01804 1114 aaKnown RBP17.95■□□□□ 0.46
SMIM4-202ENST00000476842 NIPAL4Q0D2K0 466 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 KLF1Q13351 362 aaPredicted RBP17.95■□□□□ 0.46
SMIM4-202ENST00000476842 SF3A2Q15428 464 aaKnown RBP17.95■□□□□ 0.46
SMIM4-202ENST00000476842 ZNF284Q2VY69 593 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 TMEM259Q4ZIN3 620 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 SLC45A4Q5BKX6 768 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 TRIM61Q5EBN2 209 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 KIAA1161Q6NSJ0 714 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 PRR23CQ6ZRP0 262 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 TTC13Q8NBP0 860 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 QKIQ96PU8 341 aaKnown RBP eCLIP17.95■□□□□ 0.46
SMIM4-202ENST00000476842 TLR10Q9BXR5 811 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 NUSAP1Q9BXS6 441 aaKnown RBP17.95■□□□□ 0.46
SMIM4-202ENST00000476842 CARD9Q9H257 536 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 CAPN10Q9HC96 672 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 TM9SF3Q9HD45 589 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 SEPT10Q9P0V9 454 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 DMTF1Q9Y222 760 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 TTLL3Q9Y4R7 772 aa17.95■□□□□ 0.46
SMIM4-202ENST00000476842 EP300Q09472 2414 aaPredicted RBP17.95■□□□□ 0.46
SMIM4-202ENST00000476842 RIF1Q5UIP0 2472 aaKnown RBP17.95■□□□□ 0.46
SMIM4-202ENST00000476842 H7C0C1 242 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 RIOK3O14730 519 aaKnown RBP17.94■□□□□ 0.46
SMIM4-202ENST00000476842 ITIH2P19823 946 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 PTPN3P26045 913 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 MAT2AP31153 395 aaKnown RBP17.94■□□□□ 0.46
SMIM4-202ENST00000476842 ATP5OP48047 213 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 RACK1P63244 317 aaKnown RBP17.94■□□□□ 0.46
SMIM4-202ENST00000476842 DSC2Q02487 901 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 ELP6Q0PNE2 266 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 WASHC5Q12768 1159 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 TRAF2Q12933 501 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 IHHQ14623 411 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 TMEM52BQ4KMG9 183 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 SETMARQ53H47 684 aaPredicted RBP17.94■□□□□ 0.46
SMIM4-202ENST00000476842 ERAP2Q6P179 960 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 KIAA2013Q8IYS2 634 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 ZCCHC9Q8N567 271 aaKnown RBP17.94■□□□□ 0.46
SMIM4-202ENST00000476842 C12orf50Q8NA57 414 aaPredicted RBP17.94■□□□□ 0.46
SMIM4-202ENST00000476842 HTR3CQ8WXA8 447 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 TEKT5Q96M29 485 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 AGAP3Q96P47 875 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 VAT1Q99536 393 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 C1QTNF2Q9BXJ5 285 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 PCDH12Q9NPG4 1184 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 TRMT1Q9NXH9 659 aaKnown RBP17.94■□□□□ 0.46
SMIM4-202ENST00000476842 PCDHB9Q9Y5E1 797 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 RAI2Q9Y5P3 530 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 SLCO1B1Q9Y6L6 691 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 WDR87Q6ZQQ6 2873 aa17.94■□□□□ 0.46
SMIM4-202ENST00000476842 NUMA1Q14980 2115 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 SPAG17Q6Q759 2223 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 KCNK3O14649 394 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 PGLSO95336 258 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 CFIP05156 583 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 AFF3P51826 1226 aaKnown RBP17.93■□□□□ 0.46
SMIM4-202ENST00000476842 EIF3EP60228 445 aaKnown RBP17.93■□□□□ 0.46
SMIM4-202ENST00000476842 LRRC73Q5JTD7 316 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 SEL1L2Q5TEA6 688 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 SEL1L3Q68CR1 1132 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 TCEAL6Q6IPX3 200 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 PAF1Q8N7H5 531 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 ASB12Q8WXK4 309 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 TCEAL3Q969E4 200 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 SERAC1Q96JX3 654 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 SLC17A9Q9BYT1 436 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 CEP41Q9BYV8 373 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 SLC25A51Q9H1U9 297 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 GLOD4Q9HC38 313 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 GGT7Q9UJ14 662 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 PHTF1Q9UMS5 762 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 ITM2BQ9Y287 266 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 JRKLQ9Y4A0 524 aa17.93■□□□□ 0.46
SMIM4-202ENST00000476842 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.93■□□□□ 0.46
SMIM4-202ENST00000476842 CFAP69A5D8W1 941 aa17.92■□□□□ 0.46
SMIM4-202ENST00000476842 IGLON5A6NGN9 336 aa17.92■□□□□ 0.46
SMIM4-202ENST00000476842 PRAMEF26H0Y7S4 382 aa17.92■□□□□ 0.46
SMIM4-202ENST00000476842 FZD6O60353 706 aa17.92■□□□□ 0.46
SMIM4-202ENST00000476842 MMP2P08253 660 aa17.92■□□□□ 0.46
SMIM4-202ENST00000476842 RBP3P10745 1247 aa17.92■□□□□ 0.46
SMIM4-202ENST00000476842 RBL1P28749 1068 aa17.92■□□□□ 0.46
SMIM4-202ENST00000476842 SKOR1P84550 965 aa17.92■□□□□ 0.46
SMIM4-202ENST00000476842 ARMC12Q5T9G4 340 aa17.92■□□□□ 0.46
SMIM4-202ENST00000476842 NAPEPLDQ6IQ20 393 aa17.92■□□□□ 0.46
SMIM4-202ENST00000476842 SLC13A5Q86YT5 568 aaPredicted RBP17.92■□□□□ 0.46
SMIM4-202ENST00000476842 CDKL3Q8IVW4 592 aaPredicted RBP17.92■□□□□ 0.46
SMIM4-202ENST00000476842 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.92■□□□□ 0.46
SMIM4-202ENST00000476842 PDCD6IPQ8WUM4 868 aaKnown RBP17.92■□□□□ 0.46
SMIM4-202ENST00000476842 PIH1D2Q8WWB5 315 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms