RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 TBC1D3IA0A087WXS9 549 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TBC1D3EA0A087X179 549 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TBC1D3KA0A087X1G2 549 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TBC1D3FA6NER0 549 aaPredicted RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 TBC1D3LB9A6J9 549 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 PGRMC1O00264 195 aaKnown RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 TRIM38O00635 465 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 PLRG1O43660 514 aaKnown RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 F9P00740 461 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 IL1BP01584 269 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TBC1D3HP0C7X1 549 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TACR2P21452 398 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 GLDCP23378 1020 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TLE3Q04726 772 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 KLF1Q13351 362 aaPredicted RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 ELAVL3Q14576 367 aaKnown RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 NAA30Q147X3 362 aaPredicted RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 DPYSL2Q16555 572 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TBC1D25Q3MII6 688 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 CCDC181Q5TID7 509 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 RAP1GAP2Q684P5 730 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TBC1D3GQ6DHY5 549 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TBC1D3CQ6IPX1 549 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 B4GALNT4Q76KP1 1039 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 GPR155Q7Z3F1 870 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 ZNF572Q7Z3I7 529 aaPredicted RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 IQCHQ86VS3 1027 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 RFX6Q8HWS3 928 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TBC1D3Q8IZP1 549 aaPredicted RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 PRELID2Q8N945 189 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 PCDH19Q8TAB3 1148 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 SHROOM3Q8TF72 1996 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 FRS2Q8WU20 508 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 LRRN4Q8WUT4 740 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 ATG4AQ8WYN0 398 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 RBM41Q96IZ5 413 aaKnown RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 CSPG4P5Q96PW8 444 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 CALN1Q9BXU9 219 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 KDM4CQ9H3R0 1056 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 WDCPQ9H6R7 721 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 NYNRINQ9P2P1 1898 aaKnown RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 SARDHQ9UL12 918 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 TTC7AQ9ULT0 858 aaPredicted RBP10.71□□□□□ -0.69
PGK1-203ENST00000476531 CLCA2Q9UQC9 943 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 HS3ST4Q9Y661 456 aa10.71□□□□□ -0.69
PGK1-203ENST00000476531 ARID1BQ8NFD5 2236 aaPredicted RBP10.7□□□□□ -0.7
PGK1-203ENST00000476531 MYLKQ15746 1914 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 ATMQ13315 3056 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 TEX51A0A1B0GUA7 166 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 SLC7A4O43246 635 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 SIGLEC6O43699 453 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 CREB3O43889 395 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 SDC3O75056 442 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 MAP3K6O95382 1288 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 MT-CO3P00414 261 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 PECAM1P16284 738 aaPredicted RBP10.7□□□□□ -0.7
PGK1-203ENST00000476531 DESP17661 470 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 AMPD1P23109 780 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 MAT2AP31153 395 aaKnown RBP10.7□□□□□ -0.7
PGK1-203ENST00000476531 CCR1P32246 355 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 PTPN7P35236 360 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 NUMBP49757 651 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 PLK1P53350 603 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 OVGP1Q12889 678 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 DPYSQ14117 519 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 PPP2R5EQ16537 467 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 ANKRD20A8PQ5CZ79 823 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 EFHC2Q5JST6 749 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 BRMS1LQ5PSV4 323 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 AGBL4Q5VU57 503 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 RNF219Q5W0B1 726 aaPredicted RBP10.7□□□□□ -0.7
PGK1-203ENST00000476531 TTC27Q6P3X3 843 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 PRPF39Q86UA1 669 aaKnown RBP10.7□□□□□ -0.7
PGK1-203ENST00000476531 TRIM69Q86WT6 500 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 CHSY1Q86X52 802 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 CCDC117Q8IWD4 279 aaPredicted RBP10.7□□□□□ -0.7
PGK1-203ENST00000476531 SPACA3Q8IXA5 215 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 TP53INP2Q8IXH6 220 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 ZNF683Q8IZ20 524 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 C1orf54Q8WWF1 131 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 FAF2Q96CS3 445 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 RNF157Q96PX1 679 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 PRMT1Q99873 361 aaKnown RBP10.7□□□□□ -0.7
PGK1-203ENST00000476531 SIK2Q9H0K1 926 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 C10orf88Q9H8K7 445 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 SAE1Q9UBE0 346 aaPredicted RBP10.7□□□□□ -0.7
PGK1-203ENST00000476531 DMTF1Q9Y222 760 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 CA5BQ9Y2D0 317 aa10.7□□□□□ -0.7
PGK1-203ENST00000476531 EEF2KO00418 725 aaKnown RBP10.69□□□□□ -0.7
PGK1-203ENST00000476531 KRIT1O00522 736 aa10.69□□□□□ -0.7
PGK1-203ENST00000476531 CST8O60676 142 aa10.69□□□□□ -0.7
PGK1-203ENST00000476531 LRIG2O94898 1065 aa10.69□□□□□ -0.7
PGK1-203ENST00000476531 SLU7O95391 586 aaKnown RBP10.69□□□□□ -0.7
PGK1-203ENST00000476531 ACTN2P35609 894 aa10.69□□□□□ -0.7
PGK1-203ENST00000476531 NUDT1P36639 197 aa10.69□□□□□ -0.7
PGK1-203ENST00000476531 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
PGK1-203ENST00000476531 CKAP4Q07065 602 aaKnown RBP10.69□□□□□ -0.7
PGK1-203ENST00000476531 SNX1Q13596 522 aa10.69□□□□□ -0.7
PGK1-203ENST00000476531 SLC12A1Q13621 1099 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms