RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TRIM38O00635 465 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 NEMP1O14524 444 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 SIGLEC6O43699 453 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 PROSCO94903 275 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 SERPINB6P35237 376 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 CDH6P55285 790 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 CLDN2P57739 230 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 TBX2Q13207 712 aaPredicted RBP16.38■□□□□ 0.21
COL1A1-205ENST00000476387 FGL2Q14314 439 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 AFMIDQ63HM1 303 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 TXNRD3NBQ6F5E7 133 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 GDPD4Q6W3E5 623 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 Q6ZSR6 202 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 ARHGAP12Q8IWW6 846 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 NETO2Q8NC67 525 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 OR4C6Q8NH72 309 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 ASB12Q8WXK4 309 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 RFFLQ8WZ73 363 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 NXPE2Q96DL1 559 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 KLHL32Q96NJ5 620 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 LENG8Q96PV6 779 aaPredicted RBP16.38■□□□□ 0.21
COL1A1-205ENST00000476387 ANP32EQ9BTT0 268 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 CINPQ9BW66 212 aaPredicted RBP16.38■□□□□ 0.21
COL1A1-205ENST00000476387 C1QTNF2Q9BXJ5 285 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 PCDH18Q9HCL0 1135 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 LHX3Q9UBR4 397 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 CELSR3Q9NYQ7 3312 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 LRRK1Q38SD2 2015 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 PALMO75781 387 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 PIAS2O75928 621 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 AMPD1P23109 780 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 RABIFP47224 123 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 IL10RBQ08334 325 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 SGCGQ13326 291 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 GRM3Q14832 879 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 CYTH1Q15438 398 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 ZFYVE27Q5T4F4 411 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 CFAP58Q5T655 872 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 HES3Q5TGS1 186 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 PTAR1Q7Z6K3 402 aaPredicted RBP16.37■□□□□ 0.21
COL1A1-205ENST00000476387 SLC22A18ASQ8N1D0 253 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 BMFQ96LC9 184 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 RCOR3Q9P2K3 495 aaPredicted RBP16.37■□□□□ 0.21
COL1A1-205ENST00000476387 IPO11Q9UI26 975 aaKnown RBP16.37■□□□□ 0.21
COL1A1-205ENST00000476387 MFHAS1Q9Y4C4 1052 aa16.37■□□□□ 0.21
COL1A1-205ENST00000476387 TDRD6O60522 2096 aaKnown RBP16.36■□□□□ 0.21
COL1A1-205ENST00000476387 NEMP2A6NFY4 417 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 TMEM110-MUSTN1A8MSY1 372 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 PAK4O96013 591 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-205ENST00000476387 KRT7P08729 469 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 ALPPL2P10696 532 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 XPAP23025 273 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-205ENST00000476387 MAN1A1P33908 653 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 ABL2P42684 1182 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 E2F1Q01094 437 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 RFTN1Q14699 578 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-205ENST00000476387 ARHGAP36Q6ZRI8 547 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 RHOT2Q8IXI1 618 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 ATPAF2Q8N5M1 289 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 DENND6BQ8NEG7 585 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 VOPP1Q96AW1 172 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 KLF6Q99612 283 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-205ENST00000476387 CPEB1Q9BZB8 566 aaKnown RBP16.36■□□□□ 0.21
COL1A1-205ENST00000476387 NRSN2Q9GZP1 204 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 RBSNQ9H1K0 784 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 UCKL1Q9NWZ5 548 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 NLGN3Q9NZ94 848 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 ADAMTS20P59510 1910 aa16.36■□□□□ 0.21
COL1A1-205ENST00000476387 A0A087WV48 116 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 SPTY2D1-AS1A0A0U1RR47 76 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 POM121BA6NF01 834 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 IGLON5A6NGN9 336 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 FPGTO14772 594 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 AREL1O15033 823 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 RAD51BO15315 384 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 ZNF75DP51815 510 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 HNRNPKP61978 463 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL1A1-205ENST00000476387 TARDBPQ13148 414 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL1A1-205ENST00000476387 FZD2Q14332 565 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 ZNF235Q14590 738 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 MESDQ14696 234 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 TMCO4Q5TGY1 634 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 TTC7BQ86TV6 843 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 MAP7D3Q8IWC1 876 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 PAF1Q8N7H5 531 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 TC2NQ8N9U0 490 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 KCTD6Q8NC69 237 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 SLC35G2Q8TBE7 412 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 NSMCE1Q8WV22 266 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 ZNF599Q96NL3 588 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 DUSP23Q9BVJ7 150 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 USP29Q9HBJ7 922 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 ETNK2Q9NVF9 386 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 DKK3Q9UBP4 350 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 SEPT3Q9UH03 358 aa16.35■□□□□ 0.21
COL1A1-205ENST00000476387 RIOK3O14730 519 aaKnown RBP16.34■□□□□ 0.21
COL1A1-205ENST00000476387 SCAMP1O15126 338 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 INSIG1O15503 277 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 FFAR2O15552 330 aa16.34■□□□□ 0.21
COL1A1-205ENST00000476387 SPINT1O43278 529 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms