RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 TIMP2P16035 220 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 NIPAL4Q0D2K0 466 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 ELP6Q0PNE2 266 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 TRAF2Q12933 501 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 LONRF2Q1L5Z9 754 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 ARMC12Q5T9G4 340 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 ERAP2Q6P179 960 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 PID1Q7Z2X4 250 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 RGL4Q8IZJ4 473 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 ZNF567Q8N184 647 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 SPOCK2Q92563 424 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 BIRC7Q96CA5 298 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 OSBPL9Q96SU4 736 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 DNPEPQ9ULA0 475 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 SNX12Q9UMY4 172 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 GON4LQ3T8J9 2241 aa29.8■■■□□ 2.36
HOXB3-208ENST00000476342 CFAP69A5D8W1 941 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 TSPAN6O43657 245 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 PCDH8O95206 1070 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 NFKBIAP25963 317 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 CD86P42081 329 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 CCR5P51681 352 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 TRIM69Q86WT6 500 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 IMP4Q96G21 291 aaKnown RBP29.79■■■□□ 2.36
HOXB3-208ENST00000476342 NAP1L3Q99457 506 aaPredicted RBP29.79■■■□□ 2.36
HOXB3-208ENST00000476342 PCDHB9Q9Y5E1 797 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 GPR179Q6PRD1 2367 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 CES2O00748 559 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 CPP00450 1065 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 ITPKAP23677 461 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 LRRC73Q5JTD7 316 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 ZSCAN30Q86W11 494 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 ZSWIM9Q86XI8 627 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 C17orf53Q8N3J3 647 aaPredicted RBP29.79■■■□□ 2.36
HOXB3-208ENST00000476342 RASGEF1CQ8N431 466 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 ATG4AQ8WYN0 398 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 FEM1CQ96JP0 617 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 WDR24Q96S15 920 aa29.79■■■□□ 2.36
HOXB3-208ENST00000476342 NAPGQ99747 312 aaPredicted RBP29.79■■■□□ 2.36
HOXB3-208ENST00000476342 TDRD1Q9BXT4 1180 aaKnown RBP29.79■■■□□ 2.36
HOXB3-208ENST00000476342 AREL1O15033 823 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 LIASO43766 372 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 RNGTTO60942 597 aaKnown RBP29.78■■■□□ 2.36
HOXB3-208ENST00000476342 PGLSO95336 258 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 TCP1P17987 556 aaKnown RBP29.78■■■□□ 2.36
HOXB3-208ENST00000476342 PPP2CBP62714 309 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 PPP2CAP67775 309 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 SLC14A2Q15849 920 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 ITPRIPL1Q6GPH6 555 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 KIAA1161Q6NSJ0 714 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 SYT12Q8IV01 421 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 DNASE2BQ8WZ79 361 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 RUBCNQ92622 972 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 PIGKQ92643 395 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 RBM15Q96T37 977 aaKnown RBP eCLIP29.78■■■□□ 2.363e-7■■■■□ 23.5
HOXB3-208ENST00000476342 ARRDC1-AS1Q9H2J1 176 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 USP29Q9HBJ7 922 aa29.78■■■□□ 2.36
HOXB3-208ENST00000476342 TTC7AQ9ULT0 858 aaPredicted RBP29.78■■■□□ 2.36
HOXB3-208ENST00000476342 C10orf142B7Z368 130 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 IGHV4-34P06331 123 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 MMP2P08253 660 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 NFKB1P19838 968 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 CD68P34810 354 aaPredicted RBP29.77■■■□□ 2.36
HOXB3-208ENST00000476342 HOXD12P35452 270 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 NUDT1P36639 197 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 SKOR1P84550 965 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 FAM182AQ5T1J6 154 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 ASCL5Q7RTU5 278 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 PRPF39Q86UA1 669 aaKnown RBP29.77■■■□□ 2.36
HOXB3-208ENST00000476342 HORMAD1Q86X24 394 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 NDUFAF2Q8N183 169 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 C1orf54Q8WWF1 131 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 FAM122AQ96E09 287 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 HINFPQ9BQA5 517 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 PCDH12Q9NPG4 1184 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 RSPH14Q9UHP6 348 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 PILRBQ9UKJ0 227 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 PHTF1Q9UMS5 762 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 RALGAPA1Q6GYQ0 2036 aa29.77■■■□□ 2.36
HOXB3-208ENST00000476342 OTOGLQ3ZCN5 2332 aa29.76■■■□□ 2.36
HOXB3-208ENST00000476342 TRPM6Q9BX84 2022 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 CTAGE9A4FU28 777 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 LATO43561 262 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 MPLP40238 635 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 RPS21P63220 83 aaKnown RBP29.76■■■□□ 2.35
HOXB3-208ENST00000476342 SIX1Q15475 284 aaPredicted RBP29.76■■■□□ 2.35
HOXB3-208ENST00000476342 CCNG2Q16589 344 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 ANKRD20A2Q5SQ80 823 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 ANKRD20A1Q5TYW2 823 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 ANKRD20A3Q5VUR7 823 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 RABEPKQ7Z6M1 372 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 SPATA13Q96N96 652 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 TMEM121Q9BTD3 319 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 MIR1-1HGQ9H1L0 117 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 HOMER3Q9NSC5 361 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 SUSD2Q9UGT4 822 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 EIF2B4Q9UI10 523 aaKnown RBP29.76■■■□□ 2.35
HOXB3-208ENST00000476342 ITM2BQ9Y287 266 aa29.76■■■□□ 2.35
HOXB3-208ENST00000476342 ATXN2Q99700 1313 aaKnown RBP29.76■■■□□ 2.35
HOXB3-208ENST00000476342 A0A1W2PQU0 124 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms