RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 TBC1D3FA6NER0 549 aaPredicted RBP15.27■□□□□ 0.04
SNX13-207ENST00000475800 FAM47DPA6NHR8 397 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 TBC1D3LB9A6J9 549 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 PLK4O00444 970 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 GIPC1O14908 333 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 TSPAN6O43657 245 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 KIF5CO60282 957 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 PIGNO95427 931 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 JCHAINP01591 159 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 TBC1D3HP0C7X1 549 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 GNSP15586 552 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 XPAP23025 273 aaPredicted RBP15.27■□□□□ 0.04
SNX13-207ENST00000475800 POLR2LP62875 67 aaKnown RBP15.27■□□□□ 0.04
SNX13-207ENST00000475800 ITKQ08881 620 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.04
SNX13-207ENST00000475800 UAP1L1Q3KQV9 507 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 SLC45A4Q5BKX6 768 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 PEAR1Q5VY43 1037 aaPredicted RBP15.27■□□□□ 0.04
SNX13-207ENST00000475800 TBC1D3GQ6DHY5 549 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 TBC1D3CQ6IPX1 549 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 TRIM69Q86WT6 500 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 RGL4Q8IZJ4 473 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 TBC1D3Q8IZP1 549 aaPredicted RBP15.27■□□□□ 0.04
SNX13-207ENST00000475800 PGBD5Q8N414 524 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 PAF1Q8N7H5 531 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 CEP76Q8TAP6 659 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 ACTL9Q8TC94 416 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 SPOCK2Q92563 424 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 VOPP1Q96AW1 172 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 QKIQ96PU8 341 aaKnown RBP eCLIP15.27■□□□□ 0.046e-7■■■■□ 21.8
SNX13-207ENST00000475800 SAE1Q9UBE0 346 aaPredicted RBP15.27■□□□□ 0.04
SNX13-207ENST00000475800 ATP8A1Q9Y2Q0 1164 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.27■□□□□ 0.04
SNX13-207ENST00000475800 JRKLQ9Y4A0 524 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 ATXN2Q99700 1313 aaKnown RBP15.26■□□□□ 0.03
SNX13-207ENST00000475800 C10orf142B7Z368 130 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 H7C0C1 242 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 KCNK1O00180 336 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 TM4SF5O14894 197 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 FSBPO95073 299 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 KCNK5O95279 499 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 HLA-DQB2P05538 268 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 SERPINF2P08697 491 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 ITPKAP23677 461 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 ATP5OP48047 213 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 LIMK1P53667 647 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 MAXP61244 160 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 OTUD4Q01804 1114 aaKnown RBP15.26■□□□□ 0.03
SNX13-207ENST00000475800 ELP6Q0PNE2 266 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 TEX44Q53QW1 395 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 KIAA1161Q6NSJ0 714 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 TTC7BQ86TV6 843 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 PRPF39Q86UA1 669 aaKnown RBP15.26■□□□□ 0.03
SNX13-207ENST00000475800 ZC3H18Q86VM9 953 aaKnown RBP15.26■□□□□ 0.03
SNX13-207ENST00000475800 CAMK1DQ8IU85 385 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 CDKL3Q8IVW4 592 aaPredicted RBP15.26■□□□□ 0.03
SNX13-207ENST00000475800 SNX19Q92543 992 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 ECHDC3Q96DC8 303 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 FEM1CQ96JP0 617 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 SEMA3CQ99985 751 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 TLR10Q9BXR5 811 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 FRMD8P1Q9BZ68 369 aaPredicted RBP15.26■□□□□ 0.03
SNX13-207ENST00000475800 NOD2Q9HC29 1040 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 TRMT1Q9NXH9 659 aaKnown RBP15.26■□□□□ 0.03
SNX13-207ENST00000475800 SEPT10Q9P0V9 454 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 PILRBQ9UKJ0 227 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 ANGPTL2Q9UKU9 493 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 TTLL3Q9Y4R7 772 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 FADS3Q9Y5Q0 445 aa15.26■□□□□ 0.03
SNX13-207ENST00000475800 LNP1A1A4G5 178 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 UPK3BL1B0FP48 263 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 UPK3BL2E5RIL1 263 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 RNF103O00237 685 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 NEMP1O14524 444 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 TRAFD1O14545 582 aaPredicted RBP15.25■□□□□ 0.03
SNX13-207ENST00000475800 KCNK3O14649 394 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 HTRA2O43464 458 aaPredicted RBP15.25■□□□□ 0.03
SNX13-207ENST00000475800 LATO43561 262 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 PCDH8O95206 1070 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 CD27P26842 260 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 NOVA1P51513 510 aaKnown RBP15.25■□□□□ 0.03
SNX13-207ENST00000475800 TAS2R38P59533 333 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 EIF3EP60228 445 aaKnown RBP15.25■□□□□ 0.03
SNX13-207ENST00000475800 ZBTB17Q13105 803 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 KLF1Q13351 362 aaPredicted RBP15.25■□□□□ 0.03
SNX13-207ENST00000475800 SLC14A2Q15849 920 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 UGP2Q16851 508 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 DUOXA1Q1HG43 343 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 AADACL2Q6P093 401 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 ERAP2Q6P179 960 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 HORMAD1Q86X24 394 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 MAIP1Q8WWC4 291 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 HTR3CQ8WXA8 447 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 BIRC7Q96CA5 298 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 HERPUD2Q9BSE4 406 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 DMTF1Q9Y222 760 aa15.25■□□□□ 0.03
SNX13-207ENST00000475800 A0A1B0GTW7 788 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 A0A1W2PPC4 97 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 AREL1O15033 823 aa15.24■□□□□ 0.03
SNX13-207ENST00000475800 KHNYNO15037 678 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms