RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 CPEB1Q9BZB8 566 aaKnown RBP9.53□□□□□ -0.88
PDPN-204ENST00000475043 TSPY26PQ9H489 355 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 DEF6Q9H4E7 631 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 SUV39H2Q9H5I1 410 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 KLHL11Q9NVR0 708 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 IP6K2Q9UHH9 426 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 MFHAS1Q9Y4C4 1052 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 HS3ST3A1Q9Y663 406 aa9.53□□□□□ -0.88
PDPN-204ENST00000475043 SHROOM3Q8TF72 1996 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 FAM149AA5PLN7 773 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 AREL1O15033 823 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 FFAR2O15552 330 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 SPINT1O43278 529 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 RFPL3O75679 317 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 TM7SF2O76062 418 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 DKK1O94907 266 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 CYP1A2P05177 515 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 TPM1P09493 284 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 RARAP10276 462 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 TIMP2P16035 220 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 AMPD1P23109 780 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 DGKAP23743 735 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 SERPINA4P29622 427 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 GJC1P36383 396 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 EIF4A3P38919 411 aaKnown RBP9.52□□□□□ -0.89
PDPN-204ENST00000475043 RABIFP47224 123 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 RGRP47804 291 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 THOP1P52888 689 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 IL10RBQ08334 325 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 ELP6Q0PNE2 266 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 DPYSQ14117 519 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 PDE1CQ14123 709 aaPredicted RBP9.52□□□□□ -0.89
PDPN-204ENST00000475043 KRT81Q14533 505 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 DPYSL2Q16555 572 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 UGP2Q16851 508 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 LRRK1Q38SD2 2015 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 AFMIDQ63HM1 303 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 SPECC1LQ69YQ0 1117 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 TXNRD3NBQ6F5E7 133 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 KYAT3Q6YP21 454 aaKnown RBP9.52□□□□□ -0.89
PDPN-204ENST00000475043 CCNI2Q6ZMN8 369 aaPredicted RBP9.52□□□□□ -0.89
PDPN-204ENST00000475043 KDM7AQ6ZMT4 941 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 TMPRSS7Q7RTY8 843 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 KANSL1Q7Z3B3 1105 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 POLNQ7Z5Q5 900 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 SRLQ86TD4 932 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 MARCH9Q86YJ5 346 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 CAMK1DQ8IU85 385 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 ARHGAP12Q8IWW6 846 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 TP53INP2Q8IXH6 220 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 SLC25A45Q8N413 288 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 LZTR1Q8N653 840 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 KDF1Q8NAX2 398 aaPredicted RBP9.52□□□□□ -0.89
PDPN-204ENST00000475043 CTNNBL1Q8WYA6 563 aaPredicted RBP9.52□□□□□ -0.89
PDPN-204ENST00000475043 VOPP1Q96AW1 172 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 ZNF641Q96N77 438 aaPredicted RBP9.52□□□□□ -0.89
PDPN-204ENST00000475043 LENG8Q96PV6 779 aaPredicted RBP9.52□□□□□ -0.89
PDPN-204ENST00000475043 KLF6Q99612 283 aaPredicted RBP9.52□□□□□ -0.89
PDPN-204ENST00000475043 SPSB2Q99619 263 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 C1QTNF7Q9BXJ2 289 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 ATP13A3Q9H7F0 1226 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 CAAP1Q9H8G2 361 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 ZNHIT6Q9NWK9 470 aaKnown RBP9.52□□□□□ -0.89
PDPN-204ENST00000475043 UCKL1Q9NWZ5 548 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 CTTNBP2NLQ9P2B4 639 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 DKK3Q9UBP4 350 aa9.52□□□□□ -0.89
PDPN-204ENST00000475043 SPTY2D1-AS1A0A0U1RR47 76 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 NEMP2A6NFY4 417 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 H3BM21 787 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 TRIM38O00635 465 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 SIGLEC6O43699 453 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 BUB1BO60566 1050 aaPredicted RBP9.51□□□□□ -0.89
PDPN-204ENST00000475043 PIAS2O75928 621 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 PRKCGP05129 697 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 CKMT2P17540 419 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 SERPINB6P35237 376 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 GCGRP47871 477 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 SCNN1BP51168 640 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 CDH6P55285 790 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 DAB2P98082 770 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 SEMG2Q02383 582 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 SLC25A11Q02978 314 aaKnown RBP9.51□□□□□ -0.89
PDPN-204ENST00000475043 BCL2L1Q07817 233 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 SLC10A7Q0GE19 358 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 ZNF211Q13398 564 aaPredicted RBP9.51□□□□□ -0.89
PDPN-204ENST00000475043 TRIM14Q14142 442 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 FZD2Q14332 565 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 ZNF235Q14590 738 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 RFTN1Q14699 578 aaPredicted RBP9.51□□□□□ -0.89
PDPN-204ENST00000475043 LBRQ14739 615 aaKnown RBP9.51□□□□□ -0.89
PDPN-204ENST00000475043 HADHQ16836 314 aaKnown RBP9.51□□□□□ -0.89
PDPN-204ENST00000475043 ZFYVE27Q5T4F4 411 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 ERAP2Q6P179 960 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 BRAT1Q6PJG6 821 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 LIAT1Q6ZQX7 453 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 PARGQ86W56 976 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 NIPA2Q8N8Q9 360 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 DENND6BQ8NEG7 585 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 OR8K1Q8NGG5 319 aa9.51□□□□□ -0.89
PDPN-204ENST00000475043 ZNF564Q8TBZ8 553 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms