RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SHBQ15464 509 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 TCTN1Q2MV58 587 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 FBXO43Q4G163 708 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 PPP6R3Q5H9R7 873 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 KIAA1161Q6NSJ0 714 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 Q6ZSV7 163 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 GSTA5Q7RTV2 222 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 CTU1Q7Z7A3 348 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 PRR26Q8N8Z3 221 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 NEK9Q8TD19 979 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 KLHL29Q96CT2 875 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 APOLD1Q96LR9 279 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 SIN3AQ96ST3 1273 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 YME1L1Q96TA2 773 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 POLDIP3Q9BY77 421 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 SLC32A1Q9H598 525 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 PRKRIP1Q9H875 184 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 SNTG1Q9NSN8 517 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 GGA3Q9NZ52 723 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 C9orf78Q9NZ63 289 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 UTYO14607 1347 aa3.42□□□□□ -1.86
ECHDC1-213ENST00000474240 A0A0U1RQF3 1178 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 A0A1B0GVM2 712 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 A6NLC8 198 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 SERPINI2O75830 405 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 ALPLP05186 524 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 URODP06132 367 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 SRD5A1P18405 259 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 PSMA4P25789 261 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 C21orf33P30042 268 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 ARRB2P32121 409 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 LINC00205P59089 165 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 UFM1P61960 85 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 ITGADQ13349 1161 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 NEDD9Q14511 834 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 GSTA3Q16772 222 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 ZNF284Q2VY69 593 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 SLC4A8Q2Y0W8 1093 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 ZNF667Q5HYK9 610 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 ACAD10Q6JQN1 1059 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 GPAT4Q86UL3 456 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 ADHFE1Q8IWW8 467 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 MB21D2Q8IYB1 491 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 CCDC105Q8IYK2 499 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 PCYOX1LQ8NBM8 494 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 SCCPDHQ8NBX0 429 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 PPHLN1Q8NEY8 458 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 GJC3Q8NFK1 279 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 RFFLQ8WZ73 363 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 TRIB2Q92519 343 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 SNAPC3Q92966 411 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 MIB2Q96AX9 1013 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 FBXL8Q96CD0 374 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 ZBTB10Q96DT7 871 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 LRFN5Q96NI6 719 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 BBS4Q96RK4 519 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 MSTO1Q9BUK6 570 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 PAIP1Q9H074 479 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 BRF2Q9HAW0 419 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 PREBQ9HCU5 417 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 C20orf141Q9NUB4 165 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 TMEM51Q9NW97 253 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 SARDHQ9UL12 918 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 AGO1Q9UL18 857 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 A4GNTQ9UNA3 340 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 FAM96BQ9Y3D0 163 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 ADGRF5Q8IZF2 1346 aa3.41□□□□□ -1.86
ECHDC1-213ENST00000474240 LRRC53A6NM62 1247 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 HSPB2A8KAH6 182 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 BECN2A8MW95 431 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 INAFM1C9JVW0 142 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 USP17L23D6RBM5 183 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 I6L893 689 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 SMAD6O43541 496 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 KCNJ13O60928 360 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 ATP2C2O75185 946 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 SEC14L2O76054 403 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 CCNDBP1O95273 360 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 CD72P21854 359 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 ABCD3P28288 659 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 CPOXP36551 454 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 RPL3P39023 403 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 CTCFP49711 727 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 HTR6P50406 440 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 PEX5P50542 639 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 NEXNQ0ZGT2 675 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 CAPSQ13938 189 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 ARHGEF6Q15052 776 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 HSPB2Q16082 182 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 ODF3L2Q3SX64 289 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 FAM69AQ5T7M9 428 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 TXNDC8Q6A555 127 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 FAM122CQ6P4D5 195 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 DSTYKQ6XUX3 929 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 USP43Q70EL4 1123 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 MOB3CQ70IA8 216 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 LURAP1LQ8IV03 231 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 KIAA2013Q8IYS2 634 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 TEX19Q8NA77 164 aa3.4□□□□□ -1.87
ECHDC1-213ENST00000474240 MIGA1Q8NAN2 632 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms