RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 GLT6D1Q7Z4J2 308 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 PRPF39Q86UA1 669 aaKnown RBP10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 CAND1Q86VP6 1230 aaKnown RBP10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 RELL1Q8IUW5 271 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 ADHFE1Q8IWW8 467 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 PLPP6Q8IY26 295 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 OTUD6BQ8N6M0 293 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 ZNF669Q96BR6 464 aaPredicted RBP10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 CHFRQ96EP1 664 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 SHDQ96IW2 340 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 PWWP2AQ96N64 755 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 ZNF641Q96N77 438 aaPredicted RBP10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 STMN4Q9H169 189 aaPredicted RBP10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 VIPAS39Q9H9C1 493 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 PPCSQ9HAB8 311 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 SYBUQ9NX95 663 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 NINJ2Q9NZG7 142 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 SLCO3A1Q9UIG8 710 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 RPL26L1Q9UNX3 145 aaKnown RBP10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 PLAAQ9Y263 795 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 PCDHB9Q9Y5E1 797 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 PCDHGC4Q9Y5F7 938 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 RPS6KL1Q9Y6S9 549 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 LAMA3Q16787 3333 aa10.36□□□□□ -0.75
PRPF38A-202ENST00000474048 COL4A3Q01955 1670 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 PRRT4C9JH25 899 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 ARNTLO00327 626 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 KPNA3O00505 521 aaPredicted RBP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 BANF1O75531 89 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 PIGNO95427 931 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 UGT2B4P06133 528 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 MMP2P08253 660 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 ABHD2P08910 425 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 CYP2A6P11509 494 aaPredicted RBP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 TPH1P17752 444 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 CR2P20023 1033 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 ADRA1DP25100 572 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 ATP5DP30049 168 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 TIE1P35590 1138 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 GRIA1P42261 906 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 GALK1P51570 392 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 PRAMEP78395 509 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 TFF2Q03403 129 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 SFSWAPQ12872 951 aaKnown RBP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 THOC5Q13769 683 aaKnown RBP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 SLC29A2Q14542 456 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 ELAVL3Q14576 367 aaKnown RBP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 STAT4Q14765 748 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 HNRNPA1L2Q32P51 320 aaKnown RBP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 KRT71Q3SY84 523 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 FBXO43Q4G163 708 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 DGKKQ5KSL6 1271 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 FAM46CQ5VWP2 391 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 TMEM215Q68D42 235 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 ERAP2Q6P179 960 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 BRAT1Q6PJG6 821 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 DPY19L3Q6ZPD9 716 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 C3orf62Q6ZUJ4 267 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 CAMK1DQ8IU85 385 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 CTAGE3PQ8IX95 158 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 CNPY4Q8N129 248 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 UHMK1Q8TAS1 419 aaKnown RBP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 GSDMBQ8TAX9 411 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 KCNV2Q8TDN2 545 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 FAM3CQ92520 227 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 ZNF419Q96HQ0 510 aaPredicted RBP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 CYTH2Q99418 400 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 GORASP1Q9BQQ3 440 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 CPEB1Q9BZB8 566 aaKnown RBP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 GPR63Q9BZJ6 419 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 CENPHQ9H3R5 247 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 SEMA4AQ9H3S1 761 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 SUV39H2Q9H5I1 410 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 SORCS3Q9UPU3 1222 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 PKP3Q9Y446 797 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 TEX264Q9Y6I9 313 aa10.35□□□□□ -0.75
PRPF38A-202ENST00000474048 BRWD1Q9NSI6 2320 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 FAM237BA0A1B0GVD1 139 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 LOC285095A0A1B0GVY8 99 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 SMIM23A6NLE4 172 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 LOC730098B7Z3J9 87 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 STK25O00506 426 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 PFDN6O15212 129 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 USP1O94782 785 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 PGLSO95336 258 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 CD160O95971 181 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 IL1BP01584 269 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 INHBAP08476 426 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 NTSR1P30989 418 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 ADRA1AP35348 466 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 MAGEA3P43357 314 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 CHRNA4P43681 627 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 CRADDP78560 199 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 TRAF2Q12933 501 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 OLIG2Q13516 323 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 ARHGEF7Q14155 803 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 LRRC32Q14392 662 aa10.34□□□□□ -0.75
PRPF38A-202ENST00000474048 FASTKD3Q14CZ7 662 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms