RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 KLK6Q92876 244 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 HAUS1Q96CS2 278 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 SEMA3CQ99985 751 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 C1QTNF7Q9BXJ2 289 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 NOD2Q9HC29 1040 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 TMEM9BQ9NQ34 198 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 PACSIN2Q9UNF0 486 aaPredicted RBP13.88□□□□□ -0.19
USF1-205ENST00000473969 PPP2R2CQ9Y2T4 447 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 CAPN6Q9Y6Q1 641 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 FAM186AA6NE01 2351 aa13.88□□□□□ -0.19
USF1-205ENST00000473969 LNP1A1A4G5 178 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 TTC24A2A3L6 582 aaPredicted RBP13.87□□□□□ -0.19
USF1-205ENST00000473969 UPK3BL1B0FP48 263 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 HACD1B0YJ81 288 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 UPK3BL2E5RIL1 263 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 H7C0C1 242 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 APOC4-APOC2K7ER74 178 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 KCNK1O00180 336 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 ZSCAN12O43309 604 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 GDF9O60383 454 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 APOC2P02655 101 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 CD38P28907 300 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 PTPN7P35236 360 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 ATP5OP48047 213 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 GRIA4P48058 902 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 CSNK1EP49674 416 aaKnown RBP13.87□□□□□ -0.19
USF1-205ENST00000473969 FAM193AP78312 1265 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 ARMC12Q5T9G4 340 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 SEL1L2Q5TEA6 688 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 PGBD5Q8N414 524 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 SLC6A18Q96N87 628 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 SLC17A9Q9BYT1 436 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 CAPN10Q9HC96 672 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 SAE1Q9UBE0 346 aaPredicted RBP13.87□□□□□ -0.19
USF1-205ENST00000473969 PCDHGC4Q9Y5F7 938 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 MYO15AQ9UKN7 3530 aa13.87□□□□□ -0.19
USF1-205ENST00000473969 NYNRINQ9P2P1 1898 aaKnown RBP13.87□□□□□ -0.19
USF1-205ENST00000473969 A0A1B0GVT2 93 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 TSPAN11A1L157 253 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 IGLON5A6NGN9 336 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 OPHN1O60890 802 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 TM7SF2O76062 418 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 CPP00450 1065 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 PYGMP11217 842 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 PRLRP16471 622 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 CR2P20023 1033 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 HNRNPA2B1P22626 353 aaKnown RBP13.86□□□□□ -0.19
USF1-205ENST00000473969 EPHB1P54762 984 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 IFI35P80217 286 aaPredicted RBP13.86□□□□□ -0.19
USF1-205ENST00000473969 OVGP1Q12889 678 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 GRIK2Q13002 908 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 RPS6KA1Q15418 735 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 RSPO4Q2I0M5 234 aaPredicted RBP13.86□□□□□ -0.19
USF1-205ENST00000473969 ZNF284Q2VY69 593 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 UAP1L1Q3KQV9 507 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 LRRC73Q5JTD7 316 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 STPG1Q5TH74 334 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 ZC3H18Q86VM9 953 aaKnown RBP13.86□□□□□ -0.19
USF1-205ENST00000473969 TTC13Q8NBP0 860 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 TRIM58Q8NG06 486 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 C1orf216Q8TAB5 229 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 FAM174AQ8TBP5 190 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 ALG3Q92685 438 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 HES6Q96HZ4 224 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 OLFM3Q96PB7 478 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 PCDH12Q9NPG4 1184 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 FSCN3Q9NQT6 498 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 PHTF1Q9UMS5 762 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 ZFR2Q9UPR6 939 aaKnown RBP13.86□□□□□ -0.19
USF1-205ENST00000473969 ITM2BQ9Y287 266 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 ANKRD6Q9Y2G4 727 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 ATP8A1Q9Y2Q0 1164 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 PCDHB9Q9Y5E1 797 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 RAI2Q9Y5P3 530 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 DMDP11532 3685 aa13.86□□□□□ -0.19
USF1-205ENST00000473969 NUMA1Q14980 2115 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 RALGAPA1Q6GYQ0 2036 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 C4orf47A7E2U8 309 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 TRAFD1O14545 582 aaPredicted RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 RIOK3O14730 519 aaKnown RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 FPGTO14772 594 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 AREL1O15033 823 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 VILLO15195 856 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 DDX3YO15523 660 aaKnown RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 HTRA2O43464 458 aaPredicted RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 LZTS3O60299 673 aaPredicted RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 MMP20O60882 483 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 GJB3O75712 270 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 ZNF189O75820 626 aaPredicted RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 STK10O94804 968 aaKnown RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 CER1O95813 267 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 PAK4O96013 591 aaPredicted RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 HLA-DQB2P05538 268 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 CYP2A6P11509 494 aaPredicted RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 PECAM1P16284 738 aaPredicted RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 TNNT3P45378 269 aaPredicted RBP13.85□□□□□ -0.19
USF1-205ENST00000473969 LIMK1P53667 647 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 DSC2Q02487 901 aa13.85□□□□□ -0.19
USF1-205ENST00000473969 ZNF211Q13398 564 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms