RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 GALNT4Q8N4A0 578 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 ATPAF2Q8N5M1 289 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 FAM110BQ8TC76 370 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 ANKRD49Q8WVL7 239 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 ATP6V1E2Q96A05 226 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 CNBD2Q96M20 576 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 TSPAN18Q96SJ8 248 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 SERPINI1Q99574 410 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 ARHGEF38Q9NXL2 777 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 VTI1BQ9UEU0 232 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 MID2Q9UJV3 735 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 CDH9Q9ULB4 789 aa11.04□□□□□ -0.64
C9orf3-214ENST00000473778 AAR2Q9Y312 384 aaKnown RBP11.04□□□□□ -0.64
C9orf3-214ENST00000473778 PATJQ8NI35 1801 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 MYADML2A6NDP7 307 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 E7ENX8 843 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 SLC22A2O15244 555 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 IRAK2O43187 625 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 MT-CO1P00395 513 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 PENKP01210 267 aaPredicted RBP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 ITGB1P05556 798 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 THP07101 528 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 COL6A2P12110 1019 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 TSPAN8P19075 237 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 HOXC8P31273 242 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 HERC3Q15034 1050 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 TECRLQ5HYJ1 363 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 TMEM207Q6UWW9 146 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 USP50Q70EL3 339 aaPredicted RBP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 C14orf80Q86SX3 495 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 OR9I1Q8NGQ6 314 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 PDCD6IPQ8WUM4 868 aaKnown RBP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 CASP10Q92851 521 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 NMD3Q96D46 503 aaKnown RBP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 PKMYT1Q99640 499 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 EFCAB1Q9HAE3 211 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 NSMCE4AQ9NXX6 385 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 GALNT8Q9NY28 637 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 GTSE1Q9NYZ3 720 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 FBXO5Q9UKT4 447 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 ST3GAL5Q9UNP4 418 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 PTCH2Q9Y6C5 1203 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 MYO16Q9Y6X6 1858 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 DOCK4Q8N1I0 1966 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 C7orf72A4D263 438 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 A8MT66 165 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 MATN3O15232 486 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 CTSHP09668 335 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 HSPA1AP0DMV8 641 aaKnown RBP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 HSPA1BP0DMV9 641 aaKnown RBP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 CPB1P15086 417 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 YBX1P67809 324 aaKnown RBP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 LSAMPQ13449 338 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 ART3Q13508 389 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 SEPT6Q14141 434 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 FAM171BQ6P995 826 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 CHSY3Q70JA7 882 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 TMEM86AQ8N2M4 240 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 ZC3H15Q8WU90 426 aaKnown RBP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 FCRL2Q96LA5 508 aaPredicted RBP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 LRGUKQ96M69 825 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 TSNARE1Q96NA8 513 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 SLC39A3Q9BRY0 314 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 SEMA6AQ9H2E6 1030 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 NOL6Q9H6R4 1146 aaKnown RBP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 PREBQ9HCU5 417 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 VCX3AQ9NNX9 186 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 RBM22Q9NW64 420 aaKnown RBP eCLIP11.03□□□□□ -0.64
C9orf3-214ENST00000473778 NCKIPSDQ9NZQ3 722 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 LZTS1Q9Y250 596 aa11.03□□□□□ -0.64
C9orf3-214ENST00000473778 ATP6AP2A0A1C7CYW4 349 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 C17orf102A2RUQ5 167 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 PRORSD1PA6NEY8 169 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 NPHS1O60500 1241 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 GJB3O75712 270 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 ATP6AP2O75787 350 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 CSPG5O95196 566 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 PEX11BO96011 259 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 ATP6V1B1P15313 513 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 ZNF26P17031 533 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-214ENST00000473778 YWHAQP27348 245 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 ADSLP30566 484 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-214ENST00000473778 HOXC13P31276 330 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 CD151P48509 253 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 HK2P52789 917 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 MAXP61244 160 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 RPL26P61254 145 aaKnown RBP11.02□□□□□ -0.65
C9orf3-214ENST00000473778 LRP8Q14114 963 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 PTK2BQ14289 1009 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 RFTN1Q14699 578 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-214ENST00000473778 NRF1Q16656 503 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 FAM110CQ1W6H9 321 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 NADK2Q4G0N4 442 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 RARS2Q5T160 578 aaKnown RBP11.02□□□□□ -0.65
C9orf3-214ENST00000473778 CLEC6AQ6EIG7 209 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 IYDQ6PHW0 289 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 SPATA24Q86W54 205 aa11.02□□□□□ -0.65
C9orf3-214ENST00000473778 PPHLN1Q8NEY8 458 aaKnown RBP11.02□□□□□ -0.65
C9orf3-214ENST00000473778 OR13J1Q8NGT2 312 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms