RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 ATPAF2Q8N5M1 289 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 GATA6Q92908 595 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 IFT43Q96FT9 208 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 PSKH2Q96QS6 385 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 C1QTNF7Q9BXJ2 289 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 TMEM121BQ9BXQ6 578 aaPredicted RBP22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 NHEJ1Q9H9Q4 299 aaPredicted RBP22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 PTPRBP23467 1997 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 AKAP13Q12802 2813 aa22.76■■□□□ 1.23
PTP4A1-203ENST00000473334 LRRK1Q38SD2 2015 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 AKR1B15C9JRZ8 316 aaPredicted RBP22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 MUSKO15146 869 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 MAFKO60675 156 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 CD48P09326 243 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 IL4RP24394 825 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 MAN1A1P33908 653 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 AP1S1P61966 158 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 BCL2L1Q07817 233 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 SLC10A7Q0GE19 358 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 MMRN1Q13201 1228 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 TBX2Q13207 712 aaPredicted RBP22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 DPYSL3Q14195 570 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 ZNF235Q14590 738 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 ST3GAL2Q16842 350 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 ERAP2Q6P179 960 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 WRAP53Q9BUR4 548 aaKnown RBP22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 PCDH12Q9NPG4 1184 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 SPTLC3Q9NUV7 552 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 SHROOM3Q8TF72 1996 aa22.75■■□□□ 1.23
PTP4A1-203ENST00000473334 TDRD6O60522 2096 aaKnown RBP22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 PEX11BO96011 259 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 PROS1P07225 676 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 HSPA9P38646 679 aaKnown RBP22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 SCNN1BP51168 640 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 PFN3P60673 137 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 ATP13A4Q4VNC1 1196 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 ZSWIM9Q86XI8 627 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 BBS5Q8N3I7 341 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 CENPTQ96BT3 561 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 ECHDC3Q96DC8 303 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 ZNF670Q9BS34 389 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 TRIM5Q9C035 493 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 ATP8A1Q9Y2Q0 1164 aa22.74■■□□□ 1.23
PTP4A1-203ENST00000473334 EPG5Q9HCE0 2579 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 SPTY2D1-AS1A0A0U1RR47 76 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 RIOK3O14730 519 aaKnown RBP22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 PIAS2O75928 621 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 KRT7P08729 469 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 DGKAP23743 735 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 IGFALSP35858 605 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 TAS2R40P59535 323 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 FZD2Q14332 565 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 PDK2Q15119 407 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 LRRC49Q8IUZ0 686 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 MAP7D3Q8IWC1 876 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 KCTD6Q8NC69 237 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 SLC35G2Q8TBE7 412 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 NSMCE1Q8WV22 266 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 DNAJC28Q9NX36 388 aa22.73■■□□□ 1.23
PTP4A1-203ENST00000473334 ARID1BQ8NFD5 2236 aaPredicted RBP22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 TMEM110-MUSTN1A8MSY1 372 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 MFSD11O43934 449 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 MMP12P39900 470 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 PDE1CQ14123 709 aaPredicted RBP22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 MESDQ14696 234 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 CCDC157Q569K6 752 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 NCBP2-AS2Q69YL0 99 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 PARGQ86W56 976 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 RHOT2Q8IXI1 618 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 SLC25A45Q8N413 288 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 PAF1Q8N7H5 531 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 TP53I13Q8NBR0 393 aaPredicted RBP22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 PCDH19Q8TAB3 1148 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 COQ6Q9Y2Z9 468 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 PCDHGA1Q9Y5H4 931 aa22.72■■□□□ 1.23
PTP4A1-203ENST00000473334 PLXNB3Q9ULL4 1909 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 TMEM8BA6NDV4 472 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 TRAFD1O14545 582 aaPredicted RBP22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 TOR1BO14657 336 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 PRKCGP05129 697 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 C6P13671 934 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 CR2P20023 1033 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 HNRNPKP61978 463 aaKnown RBP eCLIP22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 DNAJC3Q13217 504 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 PAFAH1B3Q15102 231 aaKnown RBP22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 ANKRD20A8PQ5CZ79 823 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 ZNF542PQ5EBM4 170 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 KDM7AQ6ZMT4 941 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 TMPRSS7Q7RTY8 843 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 NSMCE3Q96MG7 304 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 NUDCD1Q96RS6 583 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 MGME1Q9BQP7 344 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 MBNL1Q9NR56 388 aaKnown RBP22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 UCKL1Q9NWZ5 548 aa22.71■■□□□ 1.23
PTP4A1-203ENST00000473334 H3BM21 787 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 SOCS5O75159 536 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 RFPL3O75679 317 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 MTA2O94776 668 aa22.7■■□□□ 1.22
PTP4A1-203ENST00000473334 CSF2P04141 144 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms