RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 EXOC2Q96KP1 924 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 KCTD15Q96SI1 283 aaPredicted RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 FUCA2Q9BTY2 467 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 SNRNP25Q9BV90 132 aaKnown RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 C1QTNF7Q9BXJ2 289 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 TRIM7Q9C029 511 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 MBNL1Q9NR56 388 aaKnown RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 CNOT8Q9UFF9 292 aaKnown RBP15.45■□□□□ 0.06
VTI1A-203ENST00000472892 SALL4Q9UJQ4 1053 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 AK5Q9Y6K8 562 aa15.45■□□□□ 0.06
VTI1A-203ENST00000472892 ARHGAP42A6NI28 874 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 RIOK3O14730 519 aaKnown RBP15.44■□□□□ 0.06
VTI1A-203ENST00000472892 DAPK3O43293 454 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 PRPSAP2O60256 369 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 PIGNO95427 931 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 HOXB3P14651 431 aaPredicted RBP15.44■□□□□ 0.06
VTI1A-203ENST00000472892 ERCC2P18074 760 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 XPAP23025 273 aaPredicted RBP15.44■□□□□ 0.06
VTI1A-203ENST00000472892 ZNF135P52742 658 aaPredicted RBP15.44■□□□□ 0.06
VTI1A-203ENST00000472892 THOP1P52888 689 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 SEMG2Q02383 582 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 KLHL30Q0D2K2 578 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 KLHL40Q2TBA0 621 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 FIGNQ5HY92 759 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 BRAT1Q6PJG6 821 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 ARHGAP12Q8IWW6 846 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 LMX1AQ8TE12 382 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 TBATAQ96M53 351 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 TUBGCP5Q96RT8 1024 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 NCAPGQ9BPX3 1015 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 WRAP53Q9BUR4 548 aaKnown RBP15.44■□□□□ 0.06
VTI1A-203ENST00000472892 ISCUQ9H1K1 167 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 EVA1BQ9NVM1 165 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 NCKIPSDQ9NZQ3 722 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 SPASTQ9UBP0 616 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 PNMA8BQ9ULN7 279 aaPredicted RBP15.44■□□□□ 0.06
VTI1A-203ENST00000472892 CACNA1GO43497 2377 aa15.44■□□□□ 0.06
VTI1A-203ENST00000472892 TDRD6O60522 2096 aaKnown RBP15.44■□□□□ 0.06
VTI1A-203ENST00000472892 TLX3O43711 291 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-203ENST00000472892 LRCH4O75427 683 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 GCATO75600 419 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 PALMO75781 387 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 MYBL1P10243 752 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 SKILP12757 684 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 EIF4A3P38919 411 aaKnown RBP15.43■□□□□ 0.06
VTI1A-203ENST00000472892 EIF2S3P41091 472 aaKnown RBP15.43■□□□□ 0.06
VTI1A-203ENST00000472892 RGRP47804 291 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 PEX5P50542 639 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 NSUN2Q08J23 767 aaKnown RBP eCLIP15.43■□□□□ 0.06
VTI1A-203ENST00000472892 AGERQ15109 404 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 CAVIN1Q6NZI2 390 aaKnown RBP15.43■□□□□ 0.06
VTI1A-203ENST00000472892 SRLQ86TD4 932 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 CAMK1DQ8IU85 385 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 IL12RB2Q99665 862 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 TCEAL2Q9H3H9 227 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-203ENST00000472892 MRPL47Q9HD33 250 aaKnown RBP15.43■□□□□ 0.06
VTI1A-203ENST00000472892 PCDH12Q9NPG4 1184 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 CWC15Q9P013 229 aaKnown RBP15.43■□□□□ 0.06
VTI1A-203ENST00000472892 SCINQ9Y6U3 715 aa15.43■□□□□ 0.06
VTI1A-203ENST00000472892 EME2A4GXA9 379 aaPredicted RBP15.42■□□□□ 0.06
VTI1A-203ENST00000472892 CFAP69A5D8W1 941 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 TMEM110-MUSTN1A8MSY1 372 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 PCK1P35558 622 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 IL10RBQ08334 325 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 DPYSQ14117 519 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 RFTN1Q14699 578 aaPredicted RBP15.42■□□□□ 0.06
VTI1A-203ENST00000472892 ACAP1Q15027 740 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 LRRC14Q15048 493 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 IRF4Q15306 451 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 WSCD2Q2TBF2 565 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 DEFB133Q30KQ1 61 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 PPP6R3Q5H9R7 873 aaPredicted RBP15.42■□□□□ 0.06
VTI1A-203ENST00000472892 MACC1Q6ZN28 852 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 ZSWIM9Q86XI8 627 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 PHACTR4Q8IZ21 702 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 RBFAQ8N0V3 343 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 NPWQ8N729 165 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 TSEN2Q8NCE0 465 aaKnown RBP15.42■□□□□ 0.06
VTI1A-203ENST00000472892 IFI44Q8TCB0 444 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 ZNF653Q96CK0 615 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 TRIM11Q96F44 468 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 BOCQ9BWV1 1114 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 ABCG4Q9H172 646 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 APOBEC3BQ9UH17 382 aaKnown RBP15.42■□□□□ 0.06
VTI1A-203ENST00000472892 PCDHB1Q9Y5F3 818 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 MYLKQ15746 1914 aa15.42■□□□□ 0.06
VTI1A-203ENST00000472892 LMO7DNF2Z398 122 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 LZTS3O60299 673 aaPredicted RBP15.41■□□□□ 0.06
VTI1A-203ENST00000472892 BRINP1O60477 761 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 SERPINC1P01008 464 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 C6P13671 934 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 LIG3P49916 1009 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 ADKP55263 362 aaKnown RBP15.41■□□□□ 0.06
VTI1A-203ENST00000472892 PPARDQ03181 441 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 C1orf61Q13536 156 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 CDKN3Q16667 212 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 BOLA3Q53S33 107 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 PRRT3Q5FWE3 981 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 FAXCQ5TGI0 409 aa15.41■□□□□ 0.06
VTI1A-203ENST00000472892 HGSNATQ68CP4 663 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms