RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 IL4RP24394 825 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 SLC8A1P32418 973 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 DRD3P35462 400 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 ETFBP38117 255 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 ZBTB16Q05516 673 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 SULT2A1Q06520 285 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 LBRQ14739 615 aaKnown RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 POLD3Q15054 466 aaPredicted RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 TTC31Q49AM3 519 aaPredicted RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 ODF2Q5BJF6 829 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 ANKRD20A8PQ5CZ79 823 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 KIAA0895LQ68EN5 471 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 NCEH1Q6PIU2 408 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 TMCO3Q6UWJ1 677 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 ZNF662Q6ZS27 426 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 USP30Q70CQ3 517 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 PEX26Q7Z412 305 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 SLCO6A1Q86UG4 719 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 NT5DC3Q86UY8 548 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 ZNF354CQ86Y25 554 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 MAP7D3Q8IWC1 876 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 SYCE1Q8N0S2 351 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 UMODL1-AS1Q8N2C9 162 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 RNF10Q8N5U6 811 aaKnown RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 KDM1BQ8NB78 822 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 PCDH19Q8TAB3 1148 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 BAHD1Q8TBE0 780 aaPredicted RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 GANCQ8TET4 914 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 FRS2Q8WU20 508 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 FAF2Q96CS3 445 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 HMCESQ96FZ2 354 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 CELF6Q96J87 481 aaKnown RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 SLC6A18Q96N87 628 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 C2orf49Q9BVC5 232 aaPredicted RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 KLC2Q9H0B6 622 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 MAGEH1Q9H213 219 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 SGK2Q9HBY8 427 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 TM7SF3Q9NS93 570 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 DDX56Q9NY93 547 aaKnown RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 RCOR3Q9P2K3 495 aaPredicted RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 VPS51Q9UID3 782 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 AMFRQ9UKV5 643 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 PCOLCE2Q9UKZ9 415 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 SARDHQ9UL12 918 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 PACSIN2Q9UNF0 486 aaPredicted RBP9.29□□□□□ -0.92
SMC4-213ENST00000472282 LRRK1Q38SD2 2015 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 USP24Q9UPU5 2620 aa9.29□□□□□ -0.92
SMC4-213ENST00000472282 TARSL2A2RTX5 802 aaKnown RBP9.28□□□□□ -0.92
SMC4-213ENST00000472282 ARHGAP42A6NI28 874 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 C3orf70A6NLC5 250 aaPredicted RBP9.28□□□□□ -0.92
SMC4-213ENST00000472282 H0Y8X5 98 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 OIP5O43482 229 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 RNASEH2AO75792 299 aaKnown RBP9.28□□□□□ -0.92
SMC4-213ENST00000472282 ZMPSTE24O75844 475 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 FTH1P19P0C7X4 201 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 CTNNA2P26232 953 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 CD27P26842 260 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 CTNNA1P35221 906 aaKnown RBP9.28□□□□□ -0.92
SMC4-213ENST00000472282 SERPINB6P35237 376 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 DNA2P51530 1060 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 NDST2P52849 883 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 YBEYP58557 167 aaPredicted RBP9.28□□□□□ -0.92
SMC4-213ENST00000472282 PPP2CBP62714 309 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 PPP2CAP67775 309 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 ARF5P84085 180 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 IL9RQ01113 521 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 SLC14A1Q13336 389 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 TRIP6Q15654 476 aaKnown RBP9.28□□□□□ -0.92
SMC4-213ENST00000472282 PARP15Q460N3 678 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 PRAMEF14Q5SWL7 426 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 NCBP2-AS2Q69YL0 99 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 MFSD7Q6UXD7 560 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 LINGO4Q6UY18 593 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 DBX2Q6ZNG2 339 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 RAB44Q7Z6P3 723 aaPredicted RBP9.28□□□□□ -0.92
SMC4-213ENST00000472282 KRTAP1-3Q8IUG1 177 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 CCDC50Q8IVM0 306 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 ARHGAP12Q8IWW6 846 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 TP53INP2Q8IXH6 220 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 KATNAL2Q8IYT4 538 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 PQLC3Q8N755 202 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 RNF157Q96PX1 679 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 ACE2Q9BYF1 805 aaPredicted RBP9.28□□□□□ -0.92
SMC4-213ENST00000472282 ZDHHC5Q9C0B5 715 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 SLC39A8Q9C0K1 460 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 LRRC19Q9H756 370 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 PRM3Q9NNZ6 103 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 RAB6BQ9NRW1 208 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 DONSONQ9NYP3 566 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 RALYQ9UKM9 306 aaKnown RBP9.28□□□□□ -0.92
SMC4-213ENST00000472282 ZMIZ1Q9ULJ6 1067 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 PYCARDQ9ULZ3 195 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 ANKRD6Q9Y2G4 727 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.28□□□□□ -0.925e-47■■■■■ 274.1
SMC4-213ENST00000472282 ACTL7AQ9Y615 435 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 CHD8Q9HCK8 2581 aa9.28□□□□□ -0.92
SMC4-213ENST00000472282 A0A1W2PPC4 97 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 CCDC66A2RUB6 948 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 ZNF487B1APH4 448 aa9.27□□□□□ -0.93
SMC4-213ENST00000472282 K7ERQ8 282 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms