RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SUV39H2Q9H5I1 410 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 DKK3Q9UBP4 350 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 GGT7Q9UJ14 662 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 SLC25A13Q9UJS0 675 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 HPCAL4Q9UM19 191 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 KCTD3Q9Y597 815 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 TEX264Q9Y6I9 313 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 DMDP11532 3685 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 BPTFQ12830 3046 aa9.96□□□□□ -0.81
SF3A1-207ENST00000471342 EDDM13A0A1B0GTR0 161 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 ALOX15BO15296 676 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 SOCS5O75159 536 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 PAPSS2O95340 614 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-207ENST00000471342 NDST3O95803 873 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 GAS8O95995 478 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 IGLV3-19P01714 112 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 DCNP07585 359 aaKnown RBP9.96□□□□□ -0.82
SF3A1-207ENST00000471342 H2AFXP16104 143 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-207ENST00000471342 TPH1P17752 444 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 NDUFV2P19404 249 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 CES1P23141 567 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 ADCY8P40145 1251 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 TERF1P54274 439 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 SNRPD1P62314 119 aaKnown RBP9.96□□□□□ -0.82
SF3A1-207ENST00000471342 CRADDP78560 199 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 CDK16Q00536 496 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 CREB5Q02930 508 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 CDK18Q07002 472 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 DMWDQ09019 674 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 MTAPQ13126 283 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 FGL2Q14314 439 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 ELAVL3Q14576 367 aaKnown RBP9.96□□□□□ -0.82
SF3A1-207ENST00000471342 ZNF235Q14590 738 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 PTPRCAPQ14761 206 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 UAP1Q16222 522 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-207ENST00000471342 HSF5Q4G112 596 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-207ENST00000471342 FNDC3BQ53EP0 1204 aaKnown RBP9.96□□□□□ -0.82
SF3A1-207ENST00000471342 AGBL4Q5VU57 503 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 SERPINA13PQ6UXR4 307 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 ARHGEF18Q6ZSZ5 1173 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 GSTA5Q7RTV2 222 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.82
SF3A1-207ENST00000471342 TSPAN33Q86UF1 283 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 PELI3Q8N2H9 469 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 SYNPOQ8N3V7 929 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 FRMD1Q8N878 549 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 TMEM105Q8N8V8 129 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 PNPLA1Q8N8W4 532 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 PIP4K2CQ8TBX8 421 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 EXOC4Q96A65 974 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 GDAP1L1Q96MZ0 367 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 ZNF641Q96N77 438 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-207ENST00000471342 KLHL32Q96NJ5 620 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 ORAI3Q9BRQ5 295 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 FICDQ9BVA6 458 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 EPHX3Q9H6B9 360 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 SCUBE2Q9NQ36 999 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 TMPRSS11EQ9UL52 423 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 NFU1Q9UMS0 254 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 PLA2G4CQ9UP65 541 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 SHOC2Q9UQ13 582 aa9.96□□□□□ -0.82
SF3A1-207ENST00000471342 SHROOM3Q8TF72 1996 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 NCOR1O75376 2440 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 A0A0J9YYE9 177 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ZCWPW2A0A1B0GU75 182 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ANKRD66B4E2M5 251 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 GOLGA8MH3BSY2 632 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 MID1O15344 667 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 DCXO43602 365 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 GPR37L1O60883 481 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ZNF189O75820 626 aaPredicted RBP9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ANXA9O76027 345 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 TRBC1P01850 177 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 UGT2B4P06133 528 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 EPHX1P07099 455 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 APRTP07741 180 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ALPIP09923 528 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 MLNP12872 115 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 HNF1BP35680 557 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 P2RY2P41231 377 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ARCN1P48444 511 aaKnown RBP9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ARSDP51689 593 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 GEMP55040 296 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 PLTPP55058 493 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 SEMG2Q02383 582 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 PTSQ03393 145 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ACVR1Q04771 509 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 DHX9Q08211 1270 aaKnown RBP9.95□□□□□ -0.82
SF3A1-207ENST00000471342 GALNT3Q14435 633 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 PPP1R7Q15435 360 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ZNF805Q5CZA5 627 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ITPRIPL1Q6GPH6 555 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 CRTC1Q6UUV9 634 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 GDPD4Q6W3E5 623 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 KDELC2Q7Z4H8 507 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 TMC3Q7Z5M5 1100 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 TMEM135Q86UB9 458 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 ZNF354CQ86Y25 554 aa9.95□□□□□ -0.82
SF3A1-207ENST00000471342 CCDC117Q8IWD4 279 aaPredicted RBP9.95□□□□□ -0.82
SF3A1-207ENST00000471342 CHPFQ8IZ52 775 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms