RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 GRK6P43250 576 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 CXCR3P49682 368 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 PEX5P50542 639 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 PAPOLAP51003 745 aaKnown RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 BLKP51451 505 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 HDAC4P56524 1084 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 RHBDL3P58872 404 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 RUNX2Q13950 521 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 HSPB2Q16082 182 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 CALCRLQ16602 461 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 KRTAP24-1Q3LI83 254 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 ESCO2Q56NI9 601 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 OTUD3Q5T2D3 398 aaPredicted RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 C10orf62Q5T681 223 aaPredicted RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 ANKRD45Q5TZF3 282 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 ANO1Q5XXA6 986 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 CES5AQ6NT32 575 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 MEX3BQ6ZN04 569 aaKnown RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 ZNF771Q7L3S4 317 aaPredicted RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 SHFQ7M4L6 423 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 SMIM29Q86T20 159 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 LURAP1LQ8IV03 231 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 SUGP1Q8IWZ8 645 aaKnown RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 FTSJ3Q8IY81 847 aaKnown RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 NAGSQ8N159 534 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 MUC20Q8N307 709 aaPredicted RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 CPXM2Q8N436 756 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 PARP16Q8N5Y8 322 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 CNOT9Q92600 299 aaKnown RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 ERGIC1Q969X5 290 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 OTULINQ96BN8 352 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 MTBPQ96DY7 904 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 SCMH1Q96GD3 660 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 COG8Q96MW5 612 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 INPP4AQ96PE3 977 aaPredicted RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 ZNF385AQ96PM9 386 aaKnown RBP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 OR1F2PQ96R84 312 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 NODALQ96S42 347 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 CLSTN3Q9BQT9 956 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.48□□□□□ -2.17
UBXN4-207ENST00000471246 SLC32A1Q9H598 525 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 EPHX3Q9H6B9 360 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 NOX4Q9NPH5 578 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 TCF7L2Q9NQB0 619 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 CYSLTR2Q9NS75 346 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 SLC9A2Q9UBY0 812 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 NDRG3Q9UGV2 375 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 SUFUQ9UMX1 484 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 SMCHD1A6NHR9 2005 aa1.48□□□□□ -2.17
UBXN4-207ENST00000471246 ADGRF5Q8IZF2 1346 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 IGHV4OR15-8A0A075B7B6 117 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 hDV102S1A0JD36 115 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ARHGAP10A1A4S6 786 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 TYW5A2RUC4 315 aaKnown RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 CPED1A4D0V7 1026 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 MAGEA13PA6NCF6 341 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 SH2D7A6NKC9 451 aaPredicted RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 PRSS47A8MTI9 375 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 BMPR1BO00238 502 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 TULP2O00295 520 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 WNT9BO14905 357 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 KLK10O43240 276 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 HSPA12AO43301 675 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 XPNPEP2O43895 674 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ZIC3O60481 467 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 NBNO60934 754 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 GAGE7O76087 117 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 KDM4BO94953 1096 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 PMS2P2O95744 297 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 IGLV2-11P01706 119 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 LINC00271P0C7V0 271 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 GAGE12FP0CL80 117 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 GAGE12GP0CL81 117 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 GAGE12IP0CL82 117 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ZNF8P17098 575 aaPredicted RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 AMD1P17707 334 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 EDN2P20800 178 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 DGKAP23743 735 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 CHATP28329 748 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 RYKP34925 604 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 NLRP5P59047 1200 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 YWHAZP63104 245 aaKnown RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ECT2LQ008S8 904 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ACSM2AQ08AH3 577 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 GAGE1Q13065 139 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 GAGE4Q13068 117 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 TNFAIP1Q13829 316 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 NAA25Q14CX7 972 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ARHGEF6Q15052 776 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ANKRD1Q15327 319 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 EDRF1Q3B7T1 1238 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ATP13A5Q4VNC0 1218 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 PPP6R3Q5H9R7 873 aaPredicted RBP1.47□□□□□ -2.17
UBXN4-207ENST00000471246 ZNF667Q5HYK9 610 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 PAPPA-AS1Q5QFB9 102 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 LCE1FQ5T754 118 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 BSPRYQ5W0U4 402 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 LRRC8EQ6NSJ5 796 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 C17orf99Q6UX52 265 aa1.47□□□□□ -2.17
UBXN4-207ENST00000471246 UNQ6126/PRO20091Q6UXV3 157 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms