RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ARNT2Q9HBZ2 717 aa14.8□□□□□ -0.04
CBWD3-205ENST00000469687 TMEM248Q9NWD8 314 aa14.8□□□□□ -0.04
CBWD3-205ENST00000469687 DLGAP2Q9P1A6 1054 aa14.8□□□□□ -0.04
CBWD3-205ENST00000469687 CDYLQ9Y232 598 aa14.8□□□□□ -0.04
CBWD3-205ENST00000469687 HEATR9A2RTY3 570 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 RHOQP17081 205 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 MSX2P35548 267 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-205ENST00000469687 PRKAA2P54646 552 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 POU4F1Q01851 419 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 DSG1Q02413 1049 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 PTPRCAPQ14761 206 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 TECRLQ5HYJ1 363 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 SIRPB2Q5JXA9 342 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 RASIP1Q5U651 963 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 AAGABQ6PD74 315 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 ACAD11Q709F0 780 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 SLC24A5Q71RS6 500 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 ECSITQ9BQ95 431 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 PRKD2Q9BZL6 878 aa14.79□□□□□ -0.04
CBWD3-205ENST00000469687 MARCH4Q9P2E8 410 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-205ENST00000469687 UXTQ9UBK9 157 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-205ENST00000469687 A0A087X1B8 175 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 RGSL1A5PLK6 1076 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 TADA2AO75478 443 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 CCDC166P0CW27 439 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 PAX3P23760 479 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 ACVRL1P37023 503 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 PPARGP37231 505 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-205ENST00000469687 POLD2P49005 469 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 NDST2P52849 883 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 CTXN3Q4LDR2 81 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 TMEM207Q6UWW9 146 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 CILP2Q8IUL8 1156 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 LRRC49Q8IUZ0 686 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 DSELQ8IZU8 1212 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 ARRDC2Q8TBH0 407 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 FBXO32Q969P5 355 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 RCN3Q96D15 328 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 FUBP3Q96I24 572 aaKnown RBP eCLIP14.78□□□□□ -0.04
CBWD3-205ENST00000469687 C8orf48Q96LL4 319 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 PPP1R2P1Q96PQ5 205 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 FBXO44Q9H4M3 255 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 GTSE1Q9NYZ3 720 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 CLIC5Q9NZA1 410 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 ACTL7AQ9Y615 435 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 RAG1P15918 1043 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 CST5P28325 142 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-205ENST00000469687 DPP6P42658 865 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 LEPRP48357 1165 aaKnown RBP14.78□□□□□ -0.04
CBWD3-205ENST00000469687 GATMP50440 423 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 SREBF2Q12772 1141 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 TAF10Q12962 218 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 ZRSR2Q15696 482 aaKnown RBP14.78□□□□□ -0.04
CBWD3-205ENST00000469687 NFE2Q16621 373 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-205ENST00000469687 FAM171A1Q5VUB5 890 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 RSPO2Q6UXX9 243 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-205ENST00000469687 PIM3Q86V86 326 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 OR6P1Q8NGX9 317 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 HDAC10Q969S8 669 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 PHF21BQ96EK2 531 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 GPR62Q9BZJ7 368 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 RNF186Q9NXI6 227 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 PCDHB5Q9Y5E4 795 aa14.78□□□□□ -0.04
CBWD3-205ENST00000469687 IGLV3-10A0A075B6K4 115 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 A8MT66 165 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 TMEM189-UBE2V1I3L0A0 370 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 SDHDO14521 159 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 MUSKO15146 869 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 EOMESO95936 686 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 ATXN1LP0C7T5 689 aaKnown RBP14.77□□□□□ -0.04
CBWD3-205ENST00000469687 UBTFL6P0CB48 400 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-205ENST00000469687 THRAP10827 490 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 SLC2A3P11169 496 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 SP100P23497 879 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-205ENST00000469687 ATP5F1P24539 256 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-205ENST00000469687 DNAJB1P25685 340 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 PEX2P28328 305 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 ACLYP53396 1101 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 CDKN2DP55273 166 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 SULT2A1Q06520 285 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 CYLC2Q14093 348 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-205ENST00000469687 SFT2D3Q587I9 215 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 C10orf120Q5SQS8 335 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 HECTD2Q5U5R9 776 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 CPSF7Q8N684 471 aaKnown RBP14.77□□□□□ -0.04
CBWD3-205ENST00000469687 RNF148Q8N7C7 305 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 PCSK9Q8NBP7 692 aaKnown RBP14.77□□□□□ -0.04
CBWD3-205ENST00000469687 PHC3Q8NDX5 983 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 TET1Q8NFU7 2136 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 GATA6Q92908 595 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 USP13Q92995 863 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-205ENST00000469687 DDX50Q9BQ39 737 aaKnown RBP14.77□□□□□ -0.04
CBWD3-205ENST00000469687 EBF3Q9H4W6 596 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 ZBTB26Q9HCK0 441 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.77□□□□□ -0.04
CBWD3-205ENST00000469687 NCKIPSDQ9NZQ3 722 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 MARCH2Q9P0N8 246 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 VTI1BQ9UEU0 232 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 CRYL1Q9Y2S2 319 aa14.77□□□□□ -0.04
CBWD3-205ENST00000469687 COPG1Q9Y678 874 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms