RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 NCF1BA6NI72 391 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-221ENST00000469415 NCF1CA8MVU1 366 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-221ENST00000469415 M0QZQ0 153 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 SIX3O95343 332 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-221ENST00000469415 NCF1P14598 390 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-221ENST00000469415 PAMP19021 973 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 YWHAQP27348 245 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 DUSP4Q13115 394 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 PRKAA1Q13131 559 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 UGP2Q16851 508 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 OR6Y1Q8NGX8 325 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 SLC39A3Q9BRY0 314 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 TBC1D13Q9NVG8 400 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 MARCH2Q9P0N8 246 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-221ENST00000469415 RAD54BQ9Y620 910 aa17.97■□□□□ 0.47
MCF2L-221ENST00000469415 RALGDSQ12967 914 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 MMEL1Q495T6 779 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 RASIP1Q5U651 963 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 DCBLD1Q8N8Z6 715 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 SERPINB11Q96P15 392 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 GPR78Q96P69 363 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 COPS7BQ9H9Q2 264 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-221ENST00000469415 GMPR2Q9P2T1 348 aaKnown RBP17.96■□□□□ 0.47
MCF2L-221ENST00000469415 DSEQ9UL01 958 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 FAM50BQ9Y247 325 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 COPG1Q9Y678 874 aaKnown RBP17.96■□□□□ 0.47
MCF2L-221ENST00000469415 RALGAPA2Q2PPJ7 1873 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 ZNF623O75123 536 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 ADAMTS4O75173 837 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 IGLV3-25P01717 112 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 CDKN2DP55273 166 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 POLE2P56282 527 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 MS4A2Q01362 244 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 FLOT2Q14254 428 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 MBTPS1Q14703 1052 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 MAPRE1Q15691 268 aaKnown RBP17.96■□□□□ 0.47
MCF2L-221ENST00000469415 BRMS1LQ5PSV4 323 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 SPATA24Q86W54 205 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 ABI1Q8IZP0 508 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 KYQ8NBH2 561 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 ACTRT2Q8TDY3 377 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 ESAMQ96AP7 390 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 DNAJC1Q96KC8 554 aaKnown RBP17.96■□□□□ 0.47
MCF2L-221ENST00000469415 TRIM8Q9BZR9 551 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 C1orf21Q9H246 121 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 TRPC7Q9HCX4 862 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 CORO1CQ9ULV4 474 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-221ENST00000469415 SORCS3Q9UPU3 1222 aa17.96■□□□□ 0.47
MCF2L-221ENST00000469415 PDCD11Q14690 1871 aaKnown RBP17.96■□□□□ 0.47
MCF2L-221ENST00000469415 MUSKO15146 869 aa17.96■□□□□ 0.46
MCF2L-221ENST00000469415 RNASEH1O60930 286 aaKnown RBP17.96■□□□□ 0.46
MCF2L-221ENST00000469415 GPC4O75487 556 aa17.96■□□□□ 0.46
MCF2L-221ENST00000469415 DPP6P42658 865 aa17.96■□□□□ 0.46
MCF2L-221ENST00000469415 MRPS35P82673 323 aaKnown RBP17.96■□□□□ 0.46
MCF2L-221ENST00000469415 POLD3Q15054 466 aaPredicted RBP17.96■□□□□ 0.46
MCF2L-221ENST00000469415 THEMIS2Q5TEJ8 643 aa17.96■□□□□ 0.46
MCF2L-221ENST00000469415 OR7D4Q8NG98 312 aa17.96■□□□□ 0.46
MCF2L-221ENST00000469415 PCDHAC1Q9H158 963 aa17.96■□□□□ 0.46
MCF2L-221ENST00000469415 TMEM114B3SHH9 223 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 FGF10O15520 208 aaPredicted RBP17.95■□□□□ 0.46
MCF2L-221ENST00000469415 GLDCP23378 1020 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 ADRA1AP35348 466 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 C1QTNF8P60827 252 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 POTEHQ6S545 545 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 CYP2R1Q6VVX0 501 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 PGBD5Q8N414 524 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 TSGA13Q96PP4 275 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 SIKE1Q9BRV8 207 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 UBE2OQ9C0C9 1292 aaKnown RBP17.95■□□□□ 0.46
MCF2L-221ENST00000469415 ZYG11BQ9C0D3 744 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 RNF186Q9NXI6 227 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 MYOCOSA0A1B0GUC4 107 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 RGSL1A5PLK6 1076 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 THRAP10827 490 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 IRF1P10914 325 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 FCGRTP55899 365 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 FAM83EQ2M2I3 478 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 AGKQ53H12 422 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 SIRPB2Q5JXA9 342 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 HECTD2Q5U5R9 776 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 MON1AQ86VX9 555 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 KDM1BQ8NB78 822 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 ISL2Q96A47 359 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 IFT43Q96FT9 208 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 SEMA6AQ9H2E6 1030 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 WDR41Q9HAD4 459 aa17.95■□□□□ 0.46
MCF2L-221ENST00000469415 A6NHS1 94 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 CYP11A1P05108 521 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 ARL1P40616 181 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-221ENST00000469415 RENBPP51606 427 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 CEACAM7Q14002 265 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 IRGCQ6NXR0 463 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 PRSS55Q6UWB4 352 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-221ENST00000469415 TMEM207Q6UWW9 146 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 RSPO2Q6UXX9 243 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-221ENST00000469415 BHLHE22Q8NFJ8 381 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-221ENST00000469415 OR13J1Q8NGT2 312 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 A8MT66 165 aa17.94■□□□□ 0.46
MCF2L-221ENST00000469415 DNAJA2O60884 412 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms