RNA–Protein interactions for RNA: ENST00000468860.1

ABCD3-204, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 3

Gene ABCD3, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-204ENST00000468860 CNGA4Q8IV77 575 aa18.29■□□□□ 0.52
ABCD3-204ENST00000468860 GATA6Q92908 595 aa18.29■□□□□ 0.52
ABCD3-204ENST00000468860 IFT43Q96FT9 208 aa18.29■□□□□ 0.52
ABCD3-204ENST00000468860 CNDP2Q96KP4 475 aaKnown RBP18.29■□□□□ 0.52
ABCD3-204ENST00000468860 CCDC42Q96M95 316 aa18.29■□□□□ 0.52
ABCD3-204ENST00000468860 PSKH2Q96QS6 385 aa18.29■□□□□ 0.52
ABCD3-204ENST00000468860 ATP13A3Q9H7F0 1226 aa18.29■□□□□ 0.52
ABCD3-204ENST00000468860 NHEJ1Q9H9Q4 299 aaPredicted RBP18.29■□□□□ 0.52
ABCD3-204ENST00000468860 ENC1O14682 589 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 MAFKO60675 156 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 SDC3O75056 442 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 LDOC1O95751 146 aaPredicted RBP18.28■□□□□ 0.52
ABCD3-204ENST00000468860 PEX11BO96011 259 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 CD48P09326 243 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 MAN1A1P33908 653 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 GJC1P36383 396 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 TAS2R40P59535 323 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 AP1S1P61966 158 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 MMRN1Q13201 1228 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 TBX2Q13207 712 aaPredicted RBP18.28■□□□□ 0.52
ABCD3-204ENST00000468860 DPYSL3Q14195 570 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 ATP13A4Q4VNC1 1196 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 ZSWIM9Q86XI8 627 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 ATPAF2Q8N5M1 289 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 CENPTQ96BT3 561 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 WRAP53Q9BUR4 548 aaKnown RBP18.28■□□□□ 0.52
ABCD3-204ENST00000468860 PCDH12Q9NPG4 1184 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 SPTLC3Q9NUV7 552 aa18.28■□□□□ 0.52
ABCD3-204ENST00000468860 AKR1B15C9JRZ8 316 aaPredicted RBP18.27■□□□□ 0.52
ABCD3-204ENST00000468860 RIOK3O14730 519 aaKnown RBP18.27■□□□□ 0.52
ABCD3-204ENST00000468860 PROS1P07225 676 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 KRT7P08729 469 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 HSPA9P38646 679 aaKnown RBP18.27■□□□□ 0.52
ABCD3-204ENST00000468860 SCNN1BP51168 640 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 PFN3P60673 137 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 BCL2L1Q07817 233 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 ZNF235Q14590 738 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 PDK2Q15119 407 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 ST3GAL2Q16842 350 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 ERAP2Q6P179 960 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 ECHDC3Q96DC8 303 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 ZNF670Q9BS34 389 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 C1QTNF7Q9BXJ2 289 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 TRIM5Q9C035 493 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 ATP8A1Q9Y2Q0 1164 aa18.27■□□□□ 0.52
ABCD3-204ENST00000468860 EPG5Q9HCE0 2579 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 SPTY2D1-AS1A0A0U1RR47 76 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 PIAS2O75928 621 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 DGKAP23743 735 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 IGFALSP35858 605 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 MMP12P39900 470 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 PDE1CQ14123 709 aaPredicted RBP18.26■□□□□ 0.51
ABCD3-204ENST00000468860 FZD2Q14332 565 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 PAFAH1B3Q15102 231 aaKnown RBP18.26■□□□□ 0.51
ABCD3-204ENST00000468860 TMPRSS7Q7RTY8 843 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 PARGQ86W56 976 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 LRRC49Q8IUZ0 686 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 BBS5Q8N3I7 341 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 SLC25A45Q8N413 288 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 TP53I13Q8NBR0 393 aaPredicted RBP18.26■□□□□ 0.51
ABCD3-204ENST00000468860 KCTD6Q8NC69 237 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 SLC35G2Q8TBE7 412 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 NSMCE1Q8WV22 266 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 NSMCE3Q96MG7 304 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 PCDHGA1Q9Y5H4 931 aa18.26■□□□□ 0.51
ABCD3-204ENST00000468860 SPEGQ15772 3267 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.25■□□□□ 0.51
ABCD3-204ENST00000468860 TMEM110-MUSTN1A8MSY1 372 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 TRAFD1O14545 582 aaPredicted RBP18.25■□□□□ 0.51
ABCD3-204ENST00000468860 MFSD11O43934 449 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 CR2P20023 1033 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 DNAJC3Q13217 504 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 MESDQ14696 234 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 ANKRD20A8PQ5CZ79 823 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 TPRG1LQ5T0D9 272 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 NCBP2-AS2Q69YL0 99 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 CCNI2Q6ZMN8 369 aaPredicted RBP18.25■□□□□ 0.51
ABCD3-204ENST00000468860 KDM7AQ6ZMT4 941 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 MAP7D3Q8IWC1 876 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 RHOT2Q8IXI1 618 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 PGBD5Q8N414 524 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 PCDH19Q8TAB3 1148 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 NUDCD1Q96RS6 583 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 MGME1Q9BQP7 344 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 MBNL1Q9NR56 388 aaKnown RBP18.25■□□□□ 0.51
ABCD3-204ENST00000468860 UCKL1Q9NWZ5 548 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 DNAJC28Q9NX36 388 aa18.25■□□□□ 0.51
ABCD3-204ENST00000468860 TMEM8BA6NDV4 472 aa18.24■□□□□ 0.51
ABCD3-204ENST00000468860 TOR1BO14657 336 aa18.24■□□□□ 0.51
ABCD3-204ENST00000468860 MTA2O94776 668 aa18.24■□□□□ 0.51
ABCD3-204ENST00000468860 CSF2P04141 144 aa18.24■□□□□ 0.51
ABCD3-204ENST00000468860 PRKCGP05129 697 aa18.24■□□□□ 0.51
ABCD3-204ENST00000468860 C6P13671 934 aa18.24■□□□□ 0.51
ABCD3-204ENST00000468860 NME1P15531 152 aaKnown RBP18.24■□□□□ 0.51
ABCD3-204ENST00000468860 ARHGAP25P42331 645 aa18.24■□□□□ 0.51
ABCD3-204ENST00000468860 ACADVLP49748 655 aa18.24■□□□□ 0.51
ABCD3-204ENST00000468860 LIG3P49916 1009 aa18.24■□□□□ 0.51
ABCD3-204ENST00000468860 HNRNPKP61978 463 aaKnown RBP eCLIP18.24■□□□□ 0.512e-7■■■■■ 27.6
ABCD3-204ENST00000468860 YPEL5P62699 121 aa18.24■□□□□ 0.51
ABCD3-204ENST00000468860 POLR2LP62875 67 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms