RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PRAMEF11O60813 436 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 USP12O75317 370 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 PRKCGP05129 697 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 CELA2BP08218 269 aaPredicted RBP24.72■■□□□ 1.55
PTCH1-210ENST00000468211 CCDC172P0C7W6 258 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 PAPOLAP51003 745 aaKnown RBP24.72■■□□□ 1.55
PTCH1-210ENST00000468211 NDST2P52849 883 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 ADKP55263 362 aaKnown RBP24.72■■□□□ 1.55
PTCH1-210ENST00000468211 YPEL5P62699 121 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 WSCD2Q2TBF2 565 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 ANO6Q4KMQ2 910 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 PRRT3Q5FWE3 981 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 CRTC1Q6UUV9 634 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 LRRC69Q6ZNQ3 347 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 CYP4V2Q6ZWL3 525 aaPredicted RBP24.72■■□□□ 1.55
PTCH1-210ENST00000468211 EFL1Q7Z2Z2 1120 aaKnown RBP24.72■■□□□ 1.55
PTCH1-210ENST00000468211 BTN2A2Q8WVV5 523 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 DEPDC7Q96QD5 511 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 KCTD15Q96SI1 283 aaPredicted RBP24.72■■□□□ 1.55
PTCH1-210ENST00000468211 IL12RB2Q99665 862 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 NCAPGQ9BPX3 1015 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 SNRNP25Q9BV90 132 aaKnown RBP24.72■■□□□ 1.55
PTCH1-210ENST00000468211 ABCG4Q9H172 646 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 SUV39H2Q9H5I1 410 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 PCDH12Q9NPG4 1184 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 PARVAQ9NVD7 372 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 SPASTQ9UBP0 616 aa24.72■■□□□ 1.55
PTCH1-210ENST00000468211 EEF2KO00418 725 aaKnown RBP24.71■■□□□ 1.55
PTCH1-210ENST00000468211 TPP1O14773 563 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 RRP8O43159 456 aaKnown RBP24.71■■□□□ 1.55
PTCH1-210ENST00000468211 ACTN2P35609 894 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 CCDC173Q0VFZ6 552 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 PTK2BQ14289 1009 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 ACAP1Q15027 740 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 UGP2Q16851 508 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 PERM1Q5SV97 790 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 MACC1Q6ZN28 852 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 ZNF571Q7Z3V5 609 aaPredicted RBP24.71■■□□□ 1.55
PTCH1-210ENST00000468211 CAMK1DQ8IU85 385 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 SLC35F3Q8IY50 421 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 BOCQ9BWV1 1114 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 MYO6Q9UM54 1294 aa24.71■■□□□ 1.55
PTCH1-210ENST00000468211 A0A1W2PNU3 283 aaPredicted RBP24.7■■□□□ 1.54
PTCH1-210ENST00000468211 EME2A4GXA9 379 aaPredicted RBP24.7■■□□□ 1.54
PTCH1-210ENST00000468211 TMEM191CA6NGB0 347 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 GOLGA6L22H0YM25 854 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 YY2O15391 372 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 C6P13671 934 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 TSHRP16473 764 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 XPAP23025 273 aaPredicted RBP24.7■■□□□ 1.54
PTCH1-210ENST00000468211 HTR7P34969 479 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 GABREP78334 506 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 FAXCQ5TGI0 409 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 AFMIDQ63HM1 303 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 ARHGAP36Q6ZRI8 547 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 ARHGAP12Q8IWW6 846 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 TSEN2Q8NCE0 465 aaKnown RBP24.7■■□□□ 1.54
PTCH1-210ENST00000468211 C1QTNF7Q9BXJ2 289 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 HAUS4Q9H6D7 363 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 EVA1BQ9NVM1 165 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 MGAQ8IWI9 3026 aa24.7■■□□□ 1.54
PTCH1-210ENST00000468211 LMO7DNF2Z398 122 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 RIOK3O14730 519 aaKnown RBP24.69■■□□□ 1.54
PTCH1-210ENST00000468211 MUSKO15146 869 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 MBD3O95983 291 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 SUOXP51687 545 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 ELP6Q0PNE2 266 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 LRRC14Q15048 493 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 NR0B2Q15466 257 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 TCEA2Q15560 299 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 ISXQ2M1V0 245 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 ERMARDQ5T6L9 678 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 RFX8Q6ZV50 586 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 TP53INP2Q8IXH6 220 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 NPWQ8N729 165 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 HCAR2Q8TDS4 363 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 TSACCQ96A04 125 aaPredicted RBP24.69■■□□□ 1.54
PTCH1-210ENST00000468211 NSMCE3Q96MG7 304 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 SLC13A1Q9BZW2 595 aa24.69■■□□□ 1.54
PTCH1-210ENST00000468211 DDX3XO00571 662 aaKnown RBP eCLIP24.68■■□□□ 1.54
PTCH1-210ENST00000468211 LZTS3O60299 673 aaPredicted RBP24.68■■□□□ 1.54
PTCH1-210ENST00000468211 ERCC2P18074 760 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 MIPP30301 263 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 MMP12P39900 470 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 LIG3P49916 1009 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 PPARDQ03181 441 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 TLE3Q04726 772 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 ASIC2Q16515 512 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 C6orf132Q5T0Z8 1188 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 KCTD16Q68DU8 428 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 SRLQ86TD4 932 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 SPACA3Q8IXA5 215 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 TBATAQ96M53 351 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 ZNF641Q96N77 438 aaPredicted RBP24.68■■□□□ 1.54
PTCH1-210ENST00000468211 NAP1L5Q96NT1 182 aaPredicted RBP24.68■■□□□ 1.54
PTCH1-210ENST00000468211 NCKIPSDQ9NZQ3 722 aa24.68■■□□□ 1.54
PTCH1-210ENST00000468211 ARHGAP42A6NI28 874 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 TOR1BO14657 336 aa24.67■■□□□ 1.54
PTCH1-210ENST00000468211 FTLP02792 175 aaPredicted RBP24.67■■□□□ 1.54
PTCH1-210ENST00000468211 ANXA6P08133 673 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms