RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 PIGNO95427 931 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 GYPCP04921 128 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 CYP1A2P05177 515 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 FAM228BP0C875 321 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 NME1P15531 152 aaKnown RBP19.27■□□□□ 0.68
COL7A1-207ENST00000467985 RENBPP51606 427 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 THOP1P52888 689 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 PFN3P60673 137 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 YPEL5P62699 121 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 PDE1CQ14123 709 aaPredicted RBP19.27■□□□□ 0.68
COL7A1-207ENST00000467985 UGP2Q16851 508 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 TMEM52BQ4KMG9 183 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 LRRC73Q5JTD7 316 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 ALKBH5Q6P6C2 394 aaKnown RBP19.27■□□□□ 0.68
COL7A1-207ENST00000467985 SRLQ86TD4 932 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 GAS2L3Q86XJ1 694 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 NPWQ8N729 165 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 ZNF599Q96NL3 588 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 DUSP23Q9BVJ7 150 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 NUP85Q9BW27 656 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 RBSNQ9H1K0 784 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.27■□□□□ 0.68
COL7A1-207ENST00000467985 EVA1BQ9NVM1 165 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 ANAPC7Q9UJX3 599 aa19.27■□□□□ 0.68
COL7A1-207ENST00000467985 MYO1FO00160 1098 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 RIOK3O14730 519 aaKnown RBP19.26■□□□□ 0.67
COL7A1-207ENST00000467985 SCAMP1O15126 338 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 JUPP14923 745 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 IL1R2P27930 398 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 DAB2P98082 770 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 CAMK2BQ13554 666 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 TMCO3Q6UWJ1 677 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 POLNQ7Z5Q5 900 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 TSEN2Q8NCE0 465 aaKnown RBP19.26■□□□□ 0.67
COL7A1-207ENST00000467985 BTN2A2Q8WVV5 523 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 HSPH1Q92598 858 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 WRAP53Q9BUR4 548 aaKnown RBP19.26■□□□□ 0.67
COL7A1-207ENST00000467985 USP29Q9HBJ7 922 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 PCDH12Q9NPG4 1184 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 SEPT3Q9UH03 358 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 CSNK1G3Q9Y6M4 447 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 APC2O95996 2303 aa19.26■□□□□ 0.67
COL7A1-207ENST00000467985 TDRD6O60522 2096 aaKnown RBP19.25■□□□□ 0.67
COL7A1-207ENST00000467985 FAM149AA5PLN7 773 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 TRABD2BA6NFA1 517 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 FFAR2O15552 330 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 CBFA2T2O43439 604 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 BUB1BO60566 1050 aaPredicted RBP19.25■□□□□ 0.67
COL7A1-207ENST00000467985 RARAP10276 462 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 HNRNPH3P31942 346 aaKnown RBP19.25■□□□□ 0.67
COL7A1-207ENST00000467985 CASP14P31944 242 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 SERPINB6P35237 376 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 AP1S1P61966 158 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 POLR2LP62875 67 aaKnown RBP19.25■□□□□ 0.67
COL7A1-207ENST00000467985 E2F1Q01094 437 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 BCL2L1Q07817 233 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 TRIM14Q14142 442 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 SMTNL2Q2TAL5 461 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 ZNF542PQ5EBM4 170 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 CCDC122Q5T0U0 273 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 CAMK1DQ8IU85 385 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 CACTIN-AS1Q8N1I8 211 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 CSPG4P5Q96PW8 444 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 PSKH2Q96QS6 385 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 XPO4Q9C0E2 1151 aaKnown RBP19.25■□□□□ 0.67
COL7A1-207ENST00000467985 NCKIPSDQ9NZQ3 722 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 CELSR3Q9NYQ7 3312 aa19.25■□□□□ 0.67
COL7A1-207ENST00000467985 CFAP69A5D8W1 941 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 CKMT1AP12532 417 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 JUNDP17535 347 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 IGFALSP35858 605 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 HSPA9P38646 679 aaKnown RBP19.24■□□□□ 0.67
COL7A1-207ENST00000467985 MMP12P39900 470 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 DUSP3P51452 185 aaPredicted RBP19.24■□□□□ 0.67
COL7A1-207ENST00000467985 LBRQ14739 615 aaKnown RBP19.24■□□□□ 0.67
COL7A1-207ENST00000467985 LRRC14Q15048 493 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 HADHQ16836 314 aaKnown RBP19.24■□□□□ 0.67
COL7A1-207ENST00000467985 SPECC1LQ69YQ0 1117 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 PAF1Q8N7H5 531 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 FAM181AQ8N9Y4 354 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 TP53I13Q8NBR0 393 aaPredicted RBP19.24■□□□□ 0.67
COL7A1-207ENST00000467985 ZNF548Q8NEK5 533 aaPredicted RBP19.24■□□□□ 0.67
COL7A1-207ENST00000467985 RFFLQ8WZ73 363 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 RCOR3Q9P2K3 495 aaPredicted RBP19.24■□□□□ 0.67
COL7A1-207ENST00000467985 LCMT1Q9UIC8 334 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 ATP8A1Q9Y2Q0 1164 aa19.24■□□□□ 0.67
COL7A1-207ENST00000467985 TMEM110-MUSTN1A8MSY1 372 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 TAF4O00268 1085 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 AQP9O43315 295 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 GIMD1P0DJR0 217 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 TCF4P15884 667 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 ITIH2P19823 946 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 RGRP47804 291 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 PEX5P50542 639 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 SLC25A11Q02978 314 aaKnown RBP19.23■□□□□ 0.67
COL7A1-207ENST00000467985 ZNF235Q14590 738 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 AGERQ15109 404 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 HES3Q5TGS1 186 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 MACC1Q6ZN28 852 aa19.23■□□□□ 0.67
COL7A1-207ENST00000467985 ARHGAP36Q6ZRI8 547 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms