RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 TEX44Q53QW1 395 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 TRIM61Q5EBN2 209 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 CCDC181Q5TID7 509 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 ZSWIM9Q86XI8 627 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 TRIM58Q8NG06 486 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 ACTL9Q8TC94 416 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 SNX19Q92543 992 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 POLR1EQ9GZS1 481 aaKnown RBP13.74□□□□□ -0.21
SSBP1-206ENST00000467681 CAPN10Q9HC96 672 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 SLCO1B1Q9Y6L6 691 aa13.74□□□□□ -0.21
SSBP1-206ENST00000467681 CNOT1A5YKK6 2376 aaKnown RBP13.74□□□□□ -0.21
SSBP1-206ENST00000467681 A0A1W2PQ67 120 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 UPK3BL1B0FP48 263 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 UPK3BL2E5RIL1 263 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 NEMP1O14524 444 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 SPINT1O43278 529 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 SOCS5O75159 536 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 NEBLO76041 1014 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 HLA-DQB2P05538 268 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 ITIH2P19823 946 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 XPAP23025 273 aaPredicted RBP13.73□□□□□ -0.21
SSBP1-206ENST00000467681 RPS21P63220 83 aaKnown RBP13.73□□□□□ -0.21
SSBP1-206ENST00000467681 RACK1P63244 317 aaKnown RBP13.73□□□□□ -0.21
SSBP1-206ENST00000467681 DSC2Q02487 901 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 CCDC173Q0VFZ6 552 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 ZBTB17Q13105 803 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 ZNF284Q2VY69 593 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 TMEM52BQ4KMG9 183 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 TMEM259Q4ZIN3 620 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 SLC45A4Q5BKX6 768 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 CFAP58Q5T655 872 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 TCEAL6Q6IPX3 200 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 PRR23CQ6ZRP0 262 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 ZC3H18Q86VM9 953 aaKnown RBP13.73□□□□□ -0.21
SSBP1-206ENST00000467681 ZSCAN30Q86W11 494 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 KIAA2013Q8IYS2 634 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 TCEAL3Q969E4 200 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 HAUS1Q96CS2 278 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 C1QTNF2Q9BXJ5 285 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 TLR10Q9BXR5 811 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 PCDH12Q9NPG4 1184 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 ZFR2Q9UPR6 939 aaKnown RBP13.73□□□□□ -0.21
SSBP1-206ENST00000467681 DMTF1Q9Y222 760 aa13.73□□□□□ -0.21
SSBP1-206ENST00000467681 ATXN2Q99700 1313 aaKnown RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 IGLON5A6NGN9 336 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 H7C0C1 242 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 SLC31A1O15431 190 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 PGLSO95336 258 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 CFIP05156 583 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 PTPN3P26045 913 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 MAT2AP31153 395 aaKnown RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 ATP5OP48047 213 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 CSNK1EP49674 416 aaKnown RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 OTUD4Q01804 1114 aaKnown RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 WASHC5Q12768 1159 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 TRAF2Q12933 501 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 KLF1Q13351 362 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 NOMO1Q15155 1222 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 SETMARQ53H47 684 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 SEL1L3Q68CR1 1132 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 KIAA1161Q6NSJ0 714 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 ZCCHC9Q8N567 271 aaKnown RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 C12orf50Q8NA57 414 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 TTC13Q8NBP0 860 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 HTR3CQ8WXA8 447 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 ASB12Q8WXK4 309 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 KLK6Q92876 244 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 SERAC1Q96JX3 654 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 TEKT5Q96M29 485 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 AGAP3Q96P47 875 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 QKIQ96PU8 341 aaKnown RBP eCLIP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 NUSAP1Q9BXS6 441 aaKnown RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 SLC17A9Q9BYT1 436 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 TM9SF3Q9HD45 589 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 TRMT1Q9NXH9 659 aaKnown RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 SEPT10Q9P0V9 454 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 RAI2Q9Y5P3 530 aa13.72□□□□□ -0.21
SSBP1-206ENST00000467681 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.72□□□□□ -0.21
SSBP1-206ENST00000467681 ASCC3Q8N3C0 2202 aaKnown RBP13.71□□□□□ -0.21
SSBP1-206ENST00000467681 TCRBV7S2A1N4TA0A589 114 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 CFAP69A5D8W1 941 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 GOLGA6L9A6NEM1 432 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 PRAMEF26H0Y7S4 382 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 WNT9AO14904 365 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 MMP20O60882 483 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 PAK4O96013 591 aaPredicted RBP13.71□□□□□ -0.21
SSBP1-206ENST00000467681 PRLP01236 227 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 MMP2P08253 660 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 AFF3P51826 1226 aaKnown RBP13.71□□□□□ -0.21
SSBP1-206ENST00000467681 EIF3EP60228 445 aaKnown RBP13.71□□□□□ -0.21
SSBP1-206ENST00000467681 LMNB2Q03252 620 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 ELP6Q0PNE2 266 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 SGCGQ13326 291 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 FGL2Q14314 439 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 LRRC73Q5JTD7 316 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 FAM182AQ5T1J6 154 aa13.71□□□□□ -0.21
SSBP1-206ENST00000467681 ARMC12Q5T9G4 340 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms