RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.37□□□□□ -1.712e-144■■■■■ 553.7
SMC4-208ENST00000467468 MAGED1Q9Y5V3 778 aaPredicted RBP4.37□□□□□ -1.71
SMC4-208ENST00000467468 TCRBV7S3A2A0A539 114 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 FAM170AA1A519 330 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 CDRT15L2A8MXV6 281 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 EIF3CLB5ME19 914 aaKnown RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 F8W810 466 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 UBE2CO00762 179 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 RRHO14718 337 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 ADAM20O43506 726 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 CNOT3O75175 753 aaKnown RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 SEC31AO94979 1220 aaKnown RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 DDAH2O95865 285 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 APOA4P06727 396 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 IRF1P10914 325 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 AKR1A1P14550 325 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 SOX2P48431 317 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 YWHAZP63104 245 aaKnown RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 ZBED6P86452 979 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 CEBPZQ03701 1054 aaKnown RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 LRMPQ12912 555 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 TAF11Q15544 211 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 EDRF1Q3B7T1 1238 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 PLK5Q496M5 336 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 ARL13AQ5H913 290 aaPredicted RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 C10orf76Q5T2E6 689 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 FAM171A1Q5VUB5 890 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 DHRS13Q6UX07 377 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 RBM44Q6ZP01 1051 aaKnown RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 FAM57BQ71RH2 274 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 TFAP2DQ7Z6R9 452 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 RHPN2Q8IUC4 686 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 TICAM1Q8IUC6 712 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 SCML4Q8N228 414 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 GPATCH11Q8N954 259 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 MPLKIPQ8TAP9 179 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 PSPC1Q8WXF1 523 aaKnown RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 CCDC34Q96HJ3 373 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 CNDP2Q96KP4 475 aaKnown RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 C1orf74Q96LT6 269 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 H2AFJQ9BTM1 129 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 TM2D2Q9BX73 214 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 TEX12Q9BXU0 123 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 FRMD8Q9BZ67 464 aaPredicted RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 TMEM184CQ9NVA4 438 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 GRHL1Q9NZI5 618 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 NLKQ9UBE8 527 aa4.36□□□□□ -1.71
SMC4-208ENST00000467468 ZHX1Q9UKY1 873 aaPredicted RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 ZNF335Q9H4Z2 1342 aaPredicted RBP4.36□□□□□ -1.71
SMC4-208ENST00000467468 MYMKA6NI61 221 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 CBY3A6NI87 242 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 TSPY2A6NKD2 308 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 C2CD4BA6NLJ0 364 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 ENTPD3O75355 529 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 CBX6O95503 412 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 HOXB5P09067 269 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 TSPY3P0CV98 308 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 TSPY8P0CW00 308 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 VDRP11473 427 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 HOXD9P28356 352 aaPredicted RBP4.35□□□□□ -1.71
SMC4-208ENST00000467468 NR4A2P43354 598 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 KRTAP10-11P60412 298 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 PSMC6P62333 389 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 TSPY1Q01534 308 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 SRSF1Q07955 248 aaKnown RBP eCLIP4.35□□□□□ -1.719e-8■■□□□ 13.7
SMC4-208ENST00000467468 FRG1Q14331 258 aaKnown RBP4.35□□□□□ -1.71
SMC4-208ENST00000467468 RNPS1Q15287 305 aaKnown RBP4.35□□□□□ -1.71
SMC4-208ENST00000467468 TWIST1Q15672 202 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 NTRK2Q16620 822 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 TMEM266Q2M3C6 531 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 C5orf22Q49AR2 442 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 GKAP1Q5VSY0 366 aaPredicted RBP4.35□□□□□ -1.71
SMC4-208ENST00000467468 GARNL3Q5VVW2 1013 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 MOB3CQ70IA8 216 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 ADGRA1Q86SQ6 560 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 Q8N9P0 234 aaPredicted RBP4.35□□□□□ -1.71
SMC4-208ENST00000467468 FAM47BQ8NA70 645 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 TMEM170AQ8WVE7 144 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 IP6K1Q92551 441 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 GTF3C6Q969F1 213 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 MMABQ96EY8 250 aaPredicted RBP4.35□□□□□ -1.71
SMC4-208ENST00000467468 ZFYVE19Q96K21 471 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 TUBB6Q9BUF5 446 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 IFT27Q9BW83 186 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 OR10A4Q9H209 315 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 CXorf56Q9H5V9 222 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 TMEM45AQ9NWC5 275 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 MRPL15Q9P015 296 aaKnown RBP4.35□□□□□ -1.71
SMC4-208ENST00000467468 ABI3Q9P2A4 366 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 MARCH4Q9P2E8 410 aaPredicted RBP4.35□□□□□ -1.71
SMC4-208ENST00000467468 HAO1Q9UJM8 370 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 FBXO4Q9UKT5 387 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 MTMR6Q9Y217 621 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 TNFSF13BQ9Y275 285 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 PCDHGB5Q9Y5G0 923 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 SESN1Q9Y6P5 492 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 FAM169AQ9Y6X4 670 aa4.35□□□□□ -1.71
SMC4-208ENST00000467468 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.34□□□□□ -1.71
SMC4-208ENST00000467468 TARSL2A2RTX5 802 aaKnown RBP4.34□□□□□ -1.71
SMC4-208ENST00000467468 USP17L23D6RBM5 183 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms