RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 HLA-FP30511 346 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 SERPINB8P50452 374 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 AP1S1P61966 158 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 PDE1BQ01064 536 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 NSUN2Q08J23 767 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDLBP-231ENST00000467435 TRAF2Q12933 501 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 CNGA3Q16281 694 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 FUT11Q495W5 492 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 LY6G5CQ5SRR4 150 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 ATXN7L2Q5T6C5 722 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-231ENST00000467435 GET4Q7L5D6 327 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-231ENST00000467435 SRLQ86TD4 932 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 OR13J1Q8NGT2 312 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 ACMSDQ8TDX5 336 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 ZNF473Q8WTR7 871 aaKnown RBP12.39□□□□□ -0.43
HDLBP-231ENST00000467435 RMDN1Q96DB5 314 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 MRPL38Q96DV4 380 aaKnown RBP12.39□□□□□ -0.43
HDLBP-231ENST00000467435 ATXN7L3BQ96GX2 97 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 MAGEB18Q96M61 343 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 ZNF317Q96PQ6 595 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-231ENST00000467435 APOL5Q9BWW9 433 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 TM6SF2Q9BZW4 377 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 LINC00597Q9H2U6 94 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 IGFLR1Q9H665 355 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 MARK1Q9P0L2 795 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 SLC17A7Q9P2U7 560 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 SLC25A13Q9UJS0 675 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 GGA2Q9UJY4 613 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 DENND4AQ7Z401 1863 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 MYO7AQ13402 2215 aa12.39□□□□□ -0.43
HDLBP-231ENST00000467435 CXorf51AA0A1B0GTR3 108 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
HDLBP-231ENST00000467435 IGSF6O95976 241 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 ALDOAP04075 364 aaKnown RBP12.38□□□□□ -0.43
HDLBP-231ENST00000467435 PIRTP0C851 137 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 PABPC1P11940 636 aaKnown RBP12.38□□□□□ -0.43
HDLBP-231ENST00000467435 SLC1A2P43004 574 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 ABCG1P45844 678 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 MPP1Q00013 466 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 UGP2Q16851 508 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 ZNF470Q6ECI4 717 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 ASTLQ6HA08 431 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-231ENST00000467435 NPAS3Q8IXF0 933 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 LRRC34Q8IZ02 419 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 NDUFAF2Q8N183 169 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 DCLK2Q8N568 766 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 OTUD6BQ8N6M0 293 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 GABPB2Q8TAK5 448 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-231ENST00000467435 PDCD6IPQ8WUM4 868 aaKnown RBP12.38□□□□□ -0.43
HDLBP-231ENST00000467435 PTPRN2Q92932 1015 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 ATP2A3Q93084 1043 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 ISL2Q96A47 359 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 TIFAQ96CG3 184 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 MYO19Q96H55 970 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 VPS39Q96JC1 886 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 FAM111AQ96PZ2 611 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 SRPK1Q96SB4 655 aaKnown RBP12.38□□□□□ -0.43
HDLBP-231ENST00000467435 CCT8L2Q96SF2 557 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 ADGRE3Q9BY15 652 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 NSRP1Q9H0G5 558 aaKnown RBP12.38□□□□□ -0.43
HDLBP-231ENST00000467435 RHOJQ9H4E5 214 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 NSUN3Q9H649 340 aaKnown RBP12.38□□□□□ -0.43
HDLBP-231ENST00000467435 GRID1Q9ULK0 1009 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 PCDHGC4Q9Y5F7 938 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 SPO11Q9Y5K1 396 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 ARL5AQ9Y689 179 aa12.38□□□□□ -0.43
HDLBP-231ENST00000467435 TCP11X1B4DZS4 312 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 GLRA3O75311 464 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 CRTAMO95727 393 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 GLP2RO95838 553 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 PRLP01236 227 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 PDHA1P08559 390 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 VIMP08670 466 aaKnown RBP12.37□□□□□ -0.43
HDLBP-231ENST00000467435 SRCP12931 536 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 DRD4P21917 467 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 CTSOP43234 321 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-231ENST00000467435 MAGEA12P43365 314 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 MAPK8P45983 427 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 CSNK1DP48730 415 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 STK19P49842 368 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-231ENST00000467435 PRAMEP78395 509 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 ACVR1Q04771 509 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 SLC20A2Q08357 652 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 DMC1Q14565 340 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 PDK4Q16654 411 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 ZSCAN26Q16670 478 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 FSTL4Q6MZW2 842 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 NEPROQ6NW34 567 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 C22orf39Q6P5X5 142 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 CDHR3Q6ZTQ4 885 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 MICALCLQ6ZW33 695 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 GLT6D1Q7Z4J2 308 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 GPR149Q86SP6 731 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 ZC3HC1Q86WB0 502 aaKnown RBP12.37□□□□□ -0.43
HDLBP-231ENST00000467435 DENND6AQ8IWF6 608 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 KIAA1958Q8N8K9 716 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 C2CD4AQ8NCU7 369 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-231ENST00000467435 OR6K2Q8NGY2 324 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 CALML6Q8TD86 181 aa12.37□□□□□ -0.43
HDLBP-231ENST00000467435 BRSK1Q8TDC3 778 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms