RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 CCNYL3P0C7X3 344 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 HNRNPH3P31942 346 aaKnown RBP12.75□□□□□ -0.37
UBR4-210ENST00000466969 GLRBP48167 497 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 PRRC2AP48634 2157 aaKnown RBP12.75□□□□□ -0.37
UBR4-210ENST00000466969 DNASE1L3Q13609 305 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 NFATC4Q14934 902 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 UGT8Q16880 541 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 MYO7BQ6PIF6 2116 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 CHSY1Q86X52 802 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 GALNT6Q8NCL4 622 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 NUDT9Q9BW91 350 aa12.75□□□□□ -0.37
UBR4-210ENST00000466969 SUCOQ9UBS9 1254 aaKnown RBP12.75□□□□□ -0.37
UBR4-210ENST00000466969 ZGRF1Q86YA3 2104 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 F5H423 210 aaPredicted RBP12.74□□□□□ -0.37
UBR4-210ENST00000466969 CEACAM4O75871 244 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 TM7SF2O76062 418 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 STSP08842 583 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 CSF2RBP32927 897 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 ASPAP45381 313 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 AP3M2P53677 418 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 INCA1Q0VD86 236 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 SQSTM1Q13501 440 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 RAP1GAP2Q684P5 730 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 MRGPRGQ86SM5 289 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 IRF2BP1Q8IU81 584 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 CEP97Q8IW35 865 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 ZNF808Q8N4W9 903 aaPredicted RBP12.74□□□□□ -0.37
UBR4-210ENST00000466969 RAB7BQ96AH8 199 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 ARHGEF26Q96DR7 871 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 PDXPQ96GD0 296 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 AHCYL2Q96HN2 611 aaKnown RBP12.74□□□□□ -0.37
UBR4-210ENST00000466969 FEM1AQ9BSK4 669 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 ACTL8Q9H568 366 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 GPR83Q9NYM4 423 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 HS3ST2Q9Y278 367 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 DGKBQ9Y6T7 804 aa12.74□□□□□ -0.37
UBR4-210ENST00000466969 ABCA4P78363 2273 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 IGHV1OR21-1A0A087WYE8 117 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 TCAF2A6NFQ2 919 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 F5H5T6 163 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 TACR2P21452 398 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 KRT83P78385 493 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 ADIGQ0VDE8 80 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 ME3Q16798 604 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 LYPLAL1Q5VWZ2 237 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 DPY19L3Q6ZPD9 716 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 STXBP4Q6ZWJ1 553 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 Q71RC1 249 aaPredicted RBP12.73□□□□□ -0.37
UBR4-210ENST00000466969 CIR1Q86X95 450 aaPredicted RBP12.73□□□□□ -0.37
UBR4-210ENST00000466969 SIX6OS1Q8N1H7 587 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 TP53I13Q8NBR0 393 aaPredicted RBP12.73□□□□□ -0.37
UBR4-210ENST00000466969 ZDHHC1Q8WTX9 485 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 RNF31Q96EP0 1072 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 FCRL2Q96LA5 508 aaPredicted RBP12.73□□□□□ -0.37
UBR4-210ENST00000466969 WDR92Q96MX6 357 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 ITM2BQ9Y287 266 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 FER1L5A0AVI2 2057 aa12.73□□□□□ -0.37
UBR4-210ENST00000466969 SSU72P8A0A1W2PR75 194 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 A6NL46 340 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 C21orf140B9A014 251 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 ZNF185O15231 689 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 MT-CO1P00395 513 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 EDN3P14138 238 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 ZNF28P17035 718 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 CD58P19256 250 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 GARSP41250 739 aaKnown RBP12.72□□□□□ -0.37
UBR4-210ENST00000466969 CYP2J2P51589 502 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 GPLD1P80108 840 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 ZNF235Q14590 738 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 IRF4Q15306 451 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 EFHC1Q5JVL4 640 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 TTC39BQ5VTQ0 682 aaPredicted RBP12.72□□□□□ -0.37
UBR4-210ENST00000466969 ARL6IP4Q66PJ3 421 aaKnown RBP12.72□□□□□ -0.37
UBR4-210ENST00000466969 CXorf57Q6NSI4 855 aaKnown RBP12.72□□□□□ -0.37
UBR4-210ENST00000466969 KCNMB4Q86W47 210 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 FBXO18Q8NFZ0 1043 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 ALG14Q96F25 216 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 SMAD5Q99717 465 aaKnown RBP12.72□□□□□ -0.37
UBR4-210ENST00000466969 APOOQ9BUR5 198 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 FGFBP2Q9BYJ0 223 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 TNKS2Q9H2K2 1166 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 C5AR2Q9P296 337 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 PDP2Q9P2J9 529 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 PADI1Q9ULC6 663 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 TLR6Q9Y2C9 796 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 NTNG1Q9Y2I2 539 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 RPH3AQ9Y2J0 694 aaPredicted RBP12.72□□□□□ -0.37
UBR4-210ENST00000466969 WASF2Q9Y6W5 498 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 LRP4O75096 1905 aa12.72□□□□□ -0.37
UBR4-210ENST00000466969 NSD1Q96L73 2696 aaPredicted RBP12.71□□□□□ -0.37
UBR4-210ENST00000466969 CHD5Q8TDI0 1954 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 K7ERQ8 282 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 VNN1O95497 513 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 ECEL1O95672 775 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 APOEP02649 317 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 RPN1P04843 607 aaKnown RBP12.71□□□□□ -0.37
UBR4-210ENST00000466969 RRM1P23921 792 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 ABL2P42684 1182 aa12.71□□□□□ -0.37
UBR4-210ENST00000466969 CASP4P49662 377 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms